DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5521 and Sipa1l3

DIOPT Version :9

Sequence 1:NP_001163748.1 Gene:CG5521 / 43242 FlyBaseID:FBgn0039466 Length:1964 Species:Drosophila melanogaster
Sequence 2:NP_001358027.1 Gene:Sipa1l3 / 292771 RGDID:1311432 Length:1776 Species:Rattus norvegicus


Alignment Length:652 Identity:133/652 - (20%)
Similarity:215/652 - (32%) Gaps:197/652 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly  1405 VRVLMRDLNGKACWDASILYSEPRNAEEPPKTTPKIQHSQPLDSMATSMVTHTPSPRHTLRHRPA 1469
            |:.::.|||..|....|:  ::.||.     ||     .....|.|::||..|.|..|:|     
  Rat   338 VQSMLFDLNEAAANRVSV--AQRRNT-----TT-----GASAASAASAMVALTASRAHSL----- 385

  Fly  1470 GVLPLAKDMAPDL------------DQLDDMLAYIGHTSPECVAP---TVSQLNAPTASPLSGNQ 1519
            |.|........||            |..:|:|....|...|....   .||...|...|| .|:.
  Rat   386 GTLDPTFTSTEDLNCKENLEQDLGDDNSNDLLLSCPHFRNEIGGERERNVSFSRASVGSP-GGSS 449

  Fly  1520 EAQAISVILNQRLLEQEFVTHSTQAPSPALRHASSNSSLQ-QPDQRSL----------------- 1566
            ||         .:.|....||.|.|....|.........| :|.|.|:                 
  Rat   450 EA---------HMAEPALSTHRTNASISVLEVPKEQQRTQSRPRQYSIEHVDLGARYYQDYFVGK 505

  Fly  1567 -HSTTASFD------SLPTRTEM---------PFQYCRLLF---SHLGLAGWERRSRT------- 1605
             |:.....|      ::..:.|.         .:|| |::|   ..:.|.|......|       
  Rat   506 EHANYFGVDEKLGPVAVSIKREKLEDHKDHGPQYQY-RIIFRTRELITLRGSILEDATPTATKHG 569

  Fly  1606 --------------------HLLQ---RSEKLMRELRNVDLQKCRETHKMAVIYVAAGQEDKGSI 1647
                                |.|:   .:.|:..:|..:|.|.....||:.::|..|||..:..:
  Rat   570 TGRGLPLKDALEYVIPELNIHCLRLALNTPKVTEQLLKLDEQGLCRKHKVGILYCKAGQSSEEEM 634

  Fly  1648 LRNTSGSSTYEMFVSALGWEIDLETHNGFLGGL--PRQGCGATAPYYATPFLEVVYHVATRMP-S 1709
            ..|......:|.|:..||.::.|:....:...|  .....|..:.|......|:::||:|.:| :
  Rat   635 YNNEEAGPAFEEFLDLLGDKVCLKGFTKYAAQLDVKTDSTGTHSLYTTYQDYEIMFHVSTLLPYT 699

  Fly  1710 DSSEAMLLKTRHLGNDEVHIVWSEHNRDYRRDILP-------TEFCDVLIVVYP----LRNGLFR 1763
            .::...||:.||:|||.|.|::.|..      .||       :.|..|.|:|..    ..|..:.
  Rat   700 PNNRQQLLRKRHIGNDIVTIIFQEPG------ALPFTPKNIRSHFQHVFIIVRVHNPCTENVCYS 758

  Fly  1764 VTVNRKPEVPWFGP-------LANESVVSGACLATLIRATAINASRTKRAALPLYQQFYEERNRS 1821
            :.|.|..:.|.|||       .....|.....||.:|.|.  ||:               .::..
  Rat   759 MAVTRSKDAPPFGPPIPNGTTFRKSDVFRDFLLAKVINAE--NAA---------------HKSDK 806

  Fly  1822 LDSVSSRYKESTTFEDFASRIYNPMPLSTLGTL---------RESNASSSAAPLASALLDHNRAS 1877
            ..::::|.::. ..:|.|....:..|:.:.|..         :|...:.:.|...||.....|.:
  Rat   807 FHTMATRTRQE-YLKDLAENCVSNTPIDSSGKFNLISLTSKKKEKTKARAGAEQHSAGAVAWRVA 870

  Fly  1878 VKGWVQAS-ID-------------------------SGPIMGIAPSASA-------GSTAAMEAA 1909
            .:.:.|.| ||                         .|.::|..|.:|.       |....::||
  Rat   871 AQDYAQGSEIDCILGISNEFVVLLDLRTKEVVFNCYCGDVIGWTPDSSTIKIFYGRGDHIFLQAA 935

  Fly  1910 TG 1911
            .|
  Rat   936 EG 937

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5521NP_001163748.1 Rap_GAP 1648..1820 CDD:280332 44/192 (23%)
Sipa1l3NP_001358027.1 Rap_GAP 635..815 CDD:396632 45/202 (22%)
PDZ_signaling 960..1030 CDD:238492
PHA03247 <1065..1706 CDD:223021
SPAR_C 1471..1721 CDD:403176
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3686
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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