DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5521 and Rap1gap

DIOPT Version :10

Sequence 1:NP_001163748.1 Gene:CG5521 / 43242 FlyBaseID:FBgn0039466 Length:1964 Species:Drosophila melanogaster
Sequence 2:XP_006538538.1 Gene:Rap1gap / 110351 MGIID:109338 Length:755 Species:Mus musculus


Alignment Length:436 Identity:100/436 - (22%)
Similarity:156/436 - (35%) Gaps:121/436 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly  1613 KLMRELRNVDLQKCRETHKMAVIYVAAGQEDKGSILRNTSGSSTYEMFVSALGWEIDLETHNGFL 1677
            |..|.:...|........|..|||...||..:..:......|..:..|:..||.::.|:...||.
Mouse   240 KASRLIVTFDEHVISNNFKFGVIYQKLGQTSEEELFSTNEESPAFVEFLEFLGQKVKLQDFKGFR 304

  Fly  1678 GGL--PRQGCGATAPYYATPFLEVVYHVATRMPSDSSEA-MLLKTRHLGNDEVHIVWSEHNRDYR 1739
            |||  .....|..:.|......|:::||:|::|....:| .|.:.||:|||.|.:|:.:.|..:.
Mouse   305 GGLDVTHGQTGTESVYCNFRNKEIMFHVSTKLPYTEGDAQQLQRKRHIGNDIVAVVFQDENTPFV 369

  Fly  1740 RDILPTEFCDVLIVVYPLRNG----LFRVTVNRKPEVPWFGPLANESVV--SGACLATLIRATAI 1798
            .|::.:.|....:||.....|    |::|:|..:.:||:|||...:..|  .|......:....|
Mouse   370 PDMIASNFLHAYVVVQAEGGGPDGPLYKVSVTARDDVPFFGPPLPDPAVFRKGPEFQEFLLTKLI 434

  Fly  1799 NA--------------SRTKRAAL-PLYQQ--------------------------FYE------ 1816
            ||              .||:.|.| .||::                          |:|      
Mouse   435 NAEYACYKAEKFAKLEERTRAALLETLYEELHIHSQSMMGLGGDDDKMENGSGGGGFFESFKRVI 499

  Fly  1817 -ERNRSLDSVSSRYKESTTFEDFASRIYNPMPLSTLGTLRESNASSSAAPLASALLDHNRASVKG 1880
             .|::|:|::....|:.           |.:..|..|:...:|...:.|...|.|:....||..|
Mouse   500 RSRSQSMDAMGLSNKKP-----------NTVSTSHSGSFTPNNPDLAKAAGISLLIPGKSASRFG 553

  Fly  1881 WVQASIDSGPIMGIAPSASAGSTAAMEAATGMSSASPRGPRKLGAPFKSVTKKHSLQHIAVG--- 1942
                  ..|..:||         .|:|.:..:...||  .||...||.|  ::.|    |:|   
Mouse   554 ------RRGSALGI---------GAVEESLIVPGKSP--TRKKSGPFGS--RRSS----AIGIEN 595

  Fly  1943 --------GGAGAGGDTP-------------------PESPTLPQR 1961
                    ....||..||                   ||.||...|
Mouse   596 IQEVQEKRESPPAGQKTPDSGHVSQEPKSENSSTQSSPEMPTTKNR 641

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5521NP_001163748.1 RALGAPB_N 491..619 CDD:466561
Rap_GAP 1648..1820 CDD:460463 54/228 (24%)
Rap1gapXP_006538538.1 GoLoco 61..81 CDD:214645
Rap_GAP 275..454 CDD:460463 46/178 (26%)
Blue background indicates that the domain is not in the aligned region.

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