DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5521 and rap1gapb

DIOPT Version :9

Sequence 1:NP_001163748.1 Gene:CG5521 / 43242 FlyBaseID:FBgn0039466 Length:1964 Species:Drosophila melanogaster
Sequence 2:XP_009300955.1 Gene:rap1gapb / 100538309 ZFINID:ZDB-GENE-131119-39 Length:721 Species:Danio rerio


Alignment Length:612 Identity:127/612 - (20%)
Similarity:212/612 - (34%) Gaps:165/612 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly  1424 YSEPRNAEEPPKTTPKIQHSQPLDSMATSMVTHTPSPRHTLRHRPAGVLPLAKDM---------- 1478
            :|..|:..:.....|:|  |.||:... .:.:..|.|..||. :.:.:..:.:.|          
Zfish    20 FSRSRHVWKQDGRIPRI--SDPLERPG-RVKSLPPLPAQTLL-KTSDIFAMIERMQSSRMDEQRC 80

  Fly  1479 --APDLDQLDDMLAY------IGHTS--PECVAP---------------TVSQLNAPTASPLSG- 1517
              .|.|...:|.:.|      :|.|.  |..:.|               :.|....|...|.|. 
Zfish    81 SLPPPLKTEEDYIPYPSVHEVLGRTGTLPLILLPQFGGYWIEGTNHDLGSSSTPEEPPPCPASQV 145

  Fly  1518 NQEAQAISVILNQRLLEQE-FVTHSTQAPSPALRHASSNSSLQQ-PDQRSLHSTTAS-----FDS 1575
            ..|..:|:.|..:..|.:| |..:|..:   ||.|...:..... .||..|.....|     .|.
Zfish   146 KLETNSIAKIYRKDFLGKEHFNYYSVDS---ALGHLIFSMKYDVIGDQEHLRLLLRSRFKTYHDV 207

  Fly  1576 LPTR--TEMP--FQYCRLLFSHLGLAGWERRSRTHLLQRSEKLMRELRNVDLQKCRETHKMAVIY 1636
            :|..  ||.|  .|..:|:...:.:    .|....|..::.:|   :...|........|..|||
Zfish   208 IPISCLTEFPNVIQMAKLVCEEVNV----DRFYPVLYPKASRL---IVTFDEHVISNNFKFGVIY 265

  Fly  1637 VAAGQEDKGSILRNTSGSSTYEMFVSALGWEIDLETHNGFLGGL--PRQGCGATAPYYATPFLEV 1699
            ....|..:..:..|...|..:..|:..||.:|||....||.|||  .....|..:.|......|:
Zfish   266 QKFAQTSEEELFGNNEESPAFVEFLEFLGEKIDLHDFKGFRGGLDVTHGQTGTESVYVNFHNKEI 330

  Fly  1700 VYHVATRMP-SDSSEAMLLKTRHLGNDEVHIVWSEHNRDYRRDILPTEFCDVLIVVYP----LRN 1759
            ::||:|::| ::.....|.:.||:|||.|.||:.|.|..:..|::.:.|....:||..    ..|
Zfish   331 MFHVSTKLPYTEGDSQQLQRKRHIGNDIVAIVFQEENTPFVPDMIASNFLHAYVVVQVENACTDN 395

  Fly  1760 GLFRVTVNRKPEVPWFGPLANESVVSGACLATLIRATAINASRTKRAALPLYQQFYEERNRSLDS 1824
            .|::|:|..:.:||:|||...:..|                                        
Zfish   396 VLYKVSVTARDDVPFFGPALPDPAV---------------------------------------- 420

  Fly  1825 VSSRYKESTTFEDFASRIYNPMPLSTLGTLRESNASSSAAPLASALLDHNRASVKG--WVQASID 1887
                :|:|:.|.:|           .|..|..:..|...|...:.|.:..|:::..  :.:..::
Zfish   421 ----FKKSSEFHEF-----------LLTKLINAEYSCYKAEKFAKLEERTRSALLETLYEELHMN 470

  Fly  1888 SGPIMGIA-------PSASAGSTAAMEA-------------ATGMSSASPRGPRKLGAPFKSVTK 1932
            |..:||:.       .....|.....|:             |.|:|:..|.          :|:.
Zfish   471 SQSMMGLGGDDDKLENGGGGGGGGFFESFKRVIRNRSQSMDAMGLSNKKPH----------TVST 525

  Fly  1933 KHSLQHIAVGGGAGAGGDTPPESPTLP 1959
            .||          |:....|||:|..|
Zfish   526 SHS----------GSFTHNPPETPKTP 542

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5521NP_001163748.1 Rap_GAP 1648..1820 CDD:280332 45/178 (25%)
rap1gapbXP_009300955.1 GoLoco 62..82 CDD:280368 1/19 (5%)
Rap_GAP 277..456 CDD:280332 54/233 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3686
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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