DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp97E and upk1a

DIOPT Version :10

Sequence 1:NP_524524.1 Gene:Tsp97E / 43241 FlyBaseID:FBgn0039465 Length:228 Species:Drosophila melanogaster
Sequence 2:NP_001035332.1 Gene:upk1a / 678515 ZFINID:ZDB-GENE-060421-2603 Length:250 Species:Danio rerio


Alignment Length:176 Identity:45/176 - (25%)
Similarity:68/176 - (38%) Gaps:56/176 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 GGFTCSKNALIALNILYVMIGFLLIGVGVYARAASIVTNLPIVG-----GILACGVI-------- 54
            |..||....::.||.:....|..|..|.::. |.......||.|     .|.|...|        
Zfish     2 GAVTCLMVTVVGLNAIAAAAGLALSAVAIWV-AVDGYKLYPISGVSGKDDIFAGAWIAIFTGFAF 65

  Fly    55 -LICISMLGLAGAVKHHQVMLFFYMIILFMLFLIQ------------FSIASSCLAVNSEQQQQF 106
             |.||  .|:..|:|..:.::..|:||:|::||.:            :.:.:|.| |..:..|.:
Zfish    66 FLTCI--FGIFAALKRSRALMLVYLIIMFIIFLFESASAITSATNRDYLVGNSNL-VKKQMLQYY 127

  Fly   107 AE---QG------WMTVPTDLRKQVQDSLKCCG---------FNAT 134
            |:   ||      |..|.|    |||    |||         :|:|
Zfish   128 ADSSTQGQQITMTWNNVMT----QVQ----CCGADGPTDWIQYNST 165

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp97ENP_524524.1 Tetraspanin 8..>130 CDD:459767 38/156 (24%)
upk1aNP_001035332.1 uroplakin_I_like_LEL 103..221 CDD:239409 18/72 (25%)

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