DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp97E and tspan13

DIOPT Version :9

Sequence 1:NP_001263002.1 Gene:Tsp97E / 43241 FlyBaseID:FBgn0039465 Length:228 Species:Drosophila melanogaster
Sequence 2:NP_989184.1 Gene:tspan13 / 394792 XenbaseID:XB-GENE-1011146 Length:201 Species:Xenopus tropicalis


Alignment Length:216 Identity:93/216 - (43%)
Similarity:134/216 - (62%) Gaps:27/216 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MCGGFTCSKNALIALNILYVMIGFLLIGVGVYARAASIVTNLPIVGGILACGVILICISMLGLAG 65
            :|||||||||:|..||:||:|:..|||||..:.....::::|.:||..:|.|::|..|:::||.|
 Frog     2 VCGGFTCSKNSLCVLNLLYIMVSLLLIGVAAWGIGFGLISSLRVVGVAVAVGILLFLIALVGLIG 66

  Fly    66 AVKHHQVMLFFYMIILFMLFLIQFSIASSCLAVNSEQQQQFAEQGW---MTVPTDLRKQVQDSLK 127
            |:|||||:|||||||||::|::|||::.:.||:|.:||.|..|.||   ....||:.:    ||.
 Frog    67 AIKHHQVLLFFYMIILFLVFVVQFSVSCASLALNKDQQDQLLEVGWNHTNGAHTDIER----SLN 127

  Fly   128 CCGFNATAPSTTSVVPPSNEPSCELINQQCCAHSSEPDCRCEPCGPLLEDKIDYAFKLCGGLGIF 192
            ||||.:.:.:.|                  |..:..||  |..|.|::|.......::.||:|.|
 Frog   128 CCGFRSYSKNDT------------------CGATCAPD--CHTCAPIIESHAAEVLRVVGGIGFF 172

  Fly   193 FSFTEVLAVFLARRYRNQHDP 213
            |||||:|.|:|..|||||.||
 Frog   173 FSFTEILGVWLTYRYRNQKDP 193

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp97ENP_001263002.1 Tetraspannin 7..204 CDD:278750 80/199 (40%)
tetraspanin_LEL <121..177 CDD:243179 13/55 (24%)
tspan13NP_989184.1 Tetraspannin 9..184 CDD:395265 79/198 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 167 1.000 Domainoid score I3805
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H8671
Inparanoid 1 1.050 199 1.000 Inparanoid score I3674
OMA 1 1.010 - - QHG52462
OrthoDB 1 1.010 - - D1203231at2759
OrthoFinder 1 1.000 - - FOG0003591
OrthoInspector 1 1.000 - - otm49463
Panther 1 1.100 - - O PTHR19282
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5169
SonicParanoid 1 1.000 - - X2941
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1212.110

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