DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp97E and Tspan13

DIOPT Version :9

Sequence 1:NP_001263002.1 Gene:Tsp97E / 43241 FlyBaseID:FBgn0039465 Length:228 Species:Drosophila melanogaster
Sequence 2:NP_001013262.1 Gene:Tspan13 / 366602 RGDID:1311788 Length:204 Species:Rattus norvegicus


Alignment Length:213 Identity:94/213 - (44%)
Similarity:135/213 - (63%) Gaps:18/213 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MCGGFTCSKNALIALNILYVMIGFLLIGVGVYARAASIVTNLPIVGGILACGVILICISMLGLAG 65
            :||||:||||.|.|||:||.::..||||:..:.....::::|.:||.::|.|:.|..|:::||.|
  Rat     2 VCGGFSCSKNCLCALNLLYTLVSLLLIGIAAWGIGFGLISSLRVVGVVIAVGIFLFLIALVGLIG 66

  Fly    66 AVKHHQVMLFFYMIILFMLFLIQFSIASSCLAVNSEQQQQFAEQGWMTVPTDLRKQVQDSLKCCG 130
            |||||||:||||||||.::|::|||::.:|||:|.|||.|..|.||... ...|..:|.:|.|||
  Rat    67 AVKHHQVLLFFYMIILLLVFIVQFSVSCACLALNREQQGQLLEVGWNNT-ASARNDIQRNLNCCG 130

  Fly   131 FNATAPSTTSVVPPSNEPSCELINQQCCAHSSEPDCRCEPCGPLLEDKIDYAFKLCGGLGIFFSF 195
            |....|:.|  .|.|            ||.|::   :|..|.|::.:......:..||:|:||||
  Rat   131 FRNYNPNDT--CPAS------------CAKSNQ---KCSSCAPIIGEYAGEVLRFVGGIGLFFSF 178

  Fly   196 TEVLAVFLARRYRNQHDP 213
            ||:|.|:|..|||||.||
  Rat   179 TEILGVWLTYRYRNQKDP 196

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp97ENP_001263002.1 Tetraspannin 7..204 CDD:278750 82/196 (42%)
tetraspanin_LEL <121..177 CDD:243179 16/55 (29%)
Tspan13NP_001013262.1 Tetraspannin <55..184 CDD:278750 62/146 (42%)
tetraspanin_LEL <115..>153 CDD:243179 15/55 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 163 1.000 Domainoid score I3875
eggNOG 1 0.900 - - E1_KOG3882
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H8671
Inparanoid 1 1.050 193 1.000 Inparanoid score I3763
OMA 1 1.010 - - QHG52462
OrthoDB 1 1.010 - - D1203231at2759
OrthoFinder 1 1.000 - - FOG0003591
OrthoInspector 1 1.000 - - otm46388
orthoMCL 1 0.900 - - OOG6_105658
Panther 1 1.100 - - O PTHR19282
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2941
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1514.840

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