DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp97E and Tspan6

DIOPT Version :10

Sequence 1:NP_524524.1 Gene:Tsp97E / 43241 FlyBaseID:FBgn0039465 Length:228 Species:Drosophila melanogaster
Sequence 2:NP_001094142.1 Gene:Tspan6 / 302313 RGDID:1560160 Length:245 Species:Rattus norvegicus


Alignment Length:258 Identity:51/258 - (19%)
Similarity:99/258 - (38%) Gaps:67/258 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 TCSKNALIALNILYVMIGFLLIGVGVYARAA-----SIV----TNLPIVGGILACGVILICISML 61
            ||.|:.|:....::.:.|.:|:.||::.:.:     |::    ||:|.|  ::..|.::|.:...
  Rat    15 TCFKSVLLIYTFIFWITGVILLAVGIWGKVSLENYFSLLNEKATNVPFV--LIGTGTVIILLGTF 77

  Fly    62 GLAGAVKHHQVMLFFYMIILFMLFLIQFSIASSCLAVNSEQQQQF------------AEQGWMTV 114
            |.....:....||..|.:.|.::||::...|........|.:..|            :.:.:.:.
  Rat    78 GCFATCRASAWMLKLYAMFLTLIFLVELVAAIVGFVFRHEIKNSFKSNYENALKEYNSTRDYRSE 142

  Fly   115 PTDLRKQVQDSLKCCGF-NATAPSTTSVVPPSNEP-SCELINQQCCAHSSEPDCRCEPCGPLLE- 176
            ..|   ::|.:|.|||. |......|:....:..| ||               |:.|.|.|..: 
  Rat   143 AVD---KIQSTLHCCGVTNYRDWKGTNYYSETGFPKSC---------------CKLEGCYPQRDA 189

  Fly   177 DK-------------IDYAFKLCGGLGIFFSFTEVLAVFLARRYRNQHDPCYLPARAVFPHDY 226
            ||             |:....:..|:....:..:::.:|||          |..:||:..:.|
  Rat   190 DKVNEEGCFIKVMTTIESEMGVVAGISFGVACFQLIGIFLA----------YCLSRAITNNQY 242

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp97ENP_524524.1 Tetraspanin 8..>130 CDD:459767 27/142 (19%)
Tspan6NP_001094142.1 Tetraspanin 17..235 CDD:459767 46/247 (19%)
TM4SF2_6_like_LEL 112..209 CDD:239414 20/114 (18%)

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