DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tsp97E and cd53

DIOPT Version :10

Sequence 1:NP_524524.1 Gene:Tsp97E / 43241 FlyBaseID:FBgn0039465 Length:228 Species:Drosophila melanogaster
Sequence 2:XP_002942834.1 Gene:cd53 / 100496085 XenbaseID:XB-GENE-868554 Length:228 Species:Xenopus tropicalis


Alignment Length:216 Identity:52/216 - (24%)
Similarity:93/216 - (43%) Gaps:33/216 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 KNALIALNILYVMIGFLLIGVGVYARAASI----VTNLP---IVGGILACGVILICISMLGLAGA 66
            |..:.|.|.|:.:.|..:|.:|:|....:|    :||.|   :...::|.|:|::....||..||
 Frog    10 KYLMFAFNFLFWVTGCSIIAIGIYFVVNNIYGDLLTNNPSLTVGNALIAIGIIIMVFGFLGCMGA 74

  Fly    67 VKHHQVMLFFYMIILFMLFLIQFSIASSCLAVNSEQQQQFA--------EQGWMTVPTDLRKQVQ 123
            :|.::.:|..:.|:|.::.|.:. |.:..|.|..:|...:.        ||......::....:|
 Frog    75 IKENKCLLLTFFILLLLILLAEV-IMAILLFVYEKQLDNYVRDRLTSSFEQNLKQNSSETWNIIQ 138

  Fly   124 DSLKCCGFNATAPSTTSVVPPSNEPSCELINQQCCAHSSEPDCRCEP-----CGPLLEDKIDYAF 183
            .:|:|||.|.|.....::  |::          |||.::...|....     |...|::..:..|
 Frog   139 RNLQCCGINGTKDWKDNI--PNS----------CCASNANSKCSQADLFKMGCSEALKNWFEKNF 191

  Fly   184 KLCGGLGIFFSFTEVLAVFLA 204
            ...|...|..|..|||.:..|
 Frog   192 LYVGVGTICISVIEVLGMSFA 212

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp97ENP_524524.1 Tetraspanin 8..>130 CDD:459767 33/135 (24%)
cd53XP_002942834.1 Tetraspanin 9..217 CDD:459767 52/216 (24%)
tetraspanin_LEL 104..195 CDD:351888 19/102 (19%)

Return to query results.
Submit another query.