DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6330 and upp1

DIOPT Version :10

Sequence 1:NP_733175.1 Gene:CG6330 / 43240 FlyBaseID:FBgn0039464 Length:368 Species:Drosophila melanogaster
Sequence 2:XP_017206833.1 Gene:upp1 / 503707 ZFINID:ZDB-GENE-050306-2 Length:317 Species:Danio rerio


Alignment Length:293 Identity:152/293 - (51%)
Similarity:206/293 - (70%) Gaps:1/293 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 DGTVKLRNSNIELMDQDILYHLALGSESHDLQEMFGDVKFVCMGGTPKRMENFAHFIMNEIGYKL 107
            ||::.:.|.:::.|..|||||..||:.:|||.:|||||||||:||:|.||::|..:|..|:|...
Zfish    20 DGSIYVNNPHLDSMTDDILYHFNLGTSTHDLPKMFGDVKFVCVGGSPWRMKSFTEYIAKELGLVD 84

  Fly   108 PAGTQLQDISAYSYRYSMYKVGPVLCVSHGMGTPSVSILMHEMIKLMYHAKCKDPVFIRIGTCGG 172
            | ..:..:|.|.:.||:||||||||.||||||.||:||::||:|||:|||:|.|...:||||.||
Zfish    85 P-NAEYPNICAGTDRYAMYKVGPVLSVSHGMGIPSISIMLHELIKLLYHARCTDVTVVRIGTSGG 148

  Fly   173 IGVDGGTVIITEDALDGQLRNSHEFTILGKTIHRPAKLDKKLARELKSLASPDDPYDTIIGKTLC 237
            ||:..|||::|:.::|...:...|.|||||.:.|..:|||:||.||.........::.|||.|:|
Zfish   149 IGLKPGTVVVTKQSVDSLFQPHLEQTILGKPVVRSTELDKELAEELLQCGKELGEFEIIIGNTMC 213

  Fly   238 TNDFYEGQGRLDGAFCDFSENEKMAYLEKLRENGVVNIEMESTIFAALTHHAGIKAAVVCVALLN 302
            |.||||||.|||||||.:||.:|..||.:....||.||||||::|||:...:.::||||||.||:
Zfish   214 TLDFYEGQARLDGAFCSYSEEDKQNYLAEAYAAGVRNIEMESSVFAAMCKLSNLRAAVVCVTLLD 278

  Fly   303 RLNGDQVNAPKEVMNEWQARPQILVSRYIRKVL 335
            |..|||:.:..||:|.:|.|||.||..||:|.|
Zfish   279 RQKGDQLTSSHEVLNNYQQRPQALVGHYIKKKL 311

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6330NP_733175.1 UP_hUPP-like 59..333 CDD:350163 146/273 (53%)
upp1XP_017206833.1 UP_hUPP-like 35..309 CDD:350163 146/274 (53%)

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