DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6330 and Upp2

DIOPT Version :9

Sequence 1:NP_733175.1 Gene:CG6330 / 43240 FlyBaseID:FBgn0039464 Length:368 Species:Drosophila melanogaster
Sequence 2:NP_001099951.1 Gene:Upp2 / 295620 RGDID:1308188 Length:316 Species:Rattus norvegicus


Alignment Length:291 Identity:144/291 - (49%)
Similarity:205/291 - (70%) Gaps:5/291 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 TVKLRNSNIELMDQDILYHLALGSESHDLQEMFGDVKFVCMGGTPKRMENFAHFIMNEIGYKLPA 109
            :|.:||.:::.||:.|||||.||:::|:|..||||  |||:||:..||:.||.|:..|:|.: ..
  Rat    24 SVYVRNPHLDAMDEGILYHLDLGTKTHNLPAMFGD--FVCVGGSSNRMKAFALFMHKELGLE-GD 85

  Fly   110 GTQLQDISAYSYRYSMYKVGPVLCVSHGMGTPSVSILMHEMIKLMYHAKCKDPVFIRIGTCGGIG 174
            |..::||.|.:.||.|:|.||||.:|||||.||:||::||:|||::||:|.|...|||||.||||
  Rat    86 GDDIEDICAGTDRYCMFKTGPVLSLSHGMGIPSISIMLHELIKLLHHARCCDVTIIRIGTSGGIG 150

  Fly   175 VDGGTVIITEDALDGQLRNSHEFTILGKTIHRPAKLDKKLARELKSLASPDDPYDTIIGKTLCTN 239
            :..|:|:||:.|:|...:...|..||...:.|..:|||:||.:|.:.:.....:.|:||.|:||.
  Rat   151 IAPGSVVITDTAVDSFFKPRFEQVILDNVVTRSTELDKELATDLFNCSREIPNFLTLIGHTMCTY 215

  Fly   240 DFYEGQGRLDGAFCDFSENEKMAYLEKLRENGVVNIEMESTIFAALTHHAGIKAAVVCVALLNRL 304
            ||||  ||||||.|.||..:|:.||::..:.||.|||||||:|||:....|::||||||.||:||
  Rat   216 DFYE--GRLDGALCCFSREKKLDYLKRAYKAGVRNIEMESTVFAAMCGLCGLRAAVVCVTLLDRL 278

  Fly   305 NGDQVNAPKEVMNEWQARPQILVSRYIRKVL 335
            ..||:|...:|:.|:|.|||:|:|.:|:|.|
  Rat   279 ESDQINLSHDVLVEYQQRPQLLISNFIKKQL 309

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6330NP_733175.1 PNP_UDP_1 50..337 CDD:294213 142/286 (50%)
Upp2NP_001099951.1 PNP_UDP_1 29..310 CDD:294213 142/286 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 259 1.000 Domainoid score I1919
eggNOG 1 0.900 - - E1_COG2820
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H12654
Inparanoid 1 1.050 304 1.000 Inparanoid score I2570
OMA 1 1.010 - - QHG59199
OrthoDB 1 1.010 - - D1423938at2759
OrthoFinder 1 1.000 - - FOG0002165
OrthoInspector 1 1.000 - - mtm9052
orthoMCL 1 0.900 - - OOG6_101919
Panther 1 1.100 - - LDO PTHR43691
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2157
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1413.880

Return to query results.
Submit another query.