DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spag1 and SWA2

DIOPT Version :10

Sequence 1:NP_651514.1 Gene:Spag1 / 43239 FlyBaseID:FBgn0039463 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_010606.1 Gene:SWA2 / 851918 SGDID:S000002728 Length:668 Species:Saccharomyces cerevisiae


Alignment Length:481 Identity:100/481 - (20%)
Similarity:168/481 - (34%) Gaps:140/481 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 VEKCTNARE----MEKIVQILRSGEEGHYPDLQRCAEEKLKALK---------PDSKLFRYEEQI 76
            :|:.|...|    .|:.::||:|.::.......|..|..:|..|         ..:.||      
Yeast   157 IEEATEFYENDVTYERYLEILKSKQKERNDLAIRKKESGIKMEKSGLSNIVGTDSNNLF------ 215

  Fly    77 KQSTDLDKTELKPILDWTDAIKTKDNALNELKKVK---QNLNLPSVR-KLSKIDLEKESKTEKPK 137
            ..:||......|.:..||......::.||...|..   ::.:||.|. ..::|..|.....|...
Yeast   216 SMATDFFNKGKKLVDQWTSFPPEANDRLNNYSKTHDKVEDYDLPQVNDSPNRILFEDNEVVENLP 280

  Fly   138 PAPKATSPSNTKNKEARIKSTDYRKWDKYDPDEEILRMDLNEERDQEQREKIISNHSKSVTTDKL 202
            ||.                          :||:::| .|...:.|..:|.....:||.|.|:..|
Yeast   281 PAD--------------------------NPDQDLL-TDFETKIDITKRTAPDVSHSSSPTSGIL 318

  Fly   203 QSE---------RDSLYERLQAQLKN---------------------LSQLEKEQFAERHRLRGN 237
            ..|         .|||.:..:..|.|                     :|.:|...:.| .:.:|.
Yeast   319 IEENSRRNEPLIEDSLLDFSEGNLTNSKSNEDSTLFNENSNTDSTIPISDIELSGYNE-FKAKGT 382

  Fly   238 ESFKAKEYENAIEEYNCSIIYDPEN---AVHAYNNRAVAHLKLKKYFSAISDCQACLQIDPMN-- 297
            ..||..:|.|:::||..|:...|.|   .:.|.:|...:.||:.:|..:|.:....|::.|.:  
Yeast   383 SLFKNGDYINSLQEYEKSLNTLPLNHPLRIIALSNIIASQLKIGEYSKSIENSSMALELFPSSKA 447

  Fly   298 -------------------IKAHLRMAEAHNAEGKHLES----LNVYKKLL--DFEPDNAIAKKA 337
                               .|..:|.||:.    :||||    |..|::|:  :|..|..:..| 
Yeast   448 KWKNKISNSDPERSFNDIWPKIMIRRAESF----EHLESFKKALETYQELIKKNFFDDKIMQGK- 507

  Fly   338 VEKLTSMLGEVAPSSATRLIIEEIDPPQLKTSEPKKEAEKSEPTVVKKPEPVVSAKKPPPIKDYD 402
                             |...:.|:||.:|.|.|.|:...:.....||.....|:...|...|  
Yeast   508 -----------------RRCQDFINPPPVKKSMPVKKKTTTTSPATKKQNLTASSSNSPISVD-- 553

  Fly   403 LAELVKPNRMVKSNLVSAAEALGNKM 428
                 ..:.:.|..|.:|..||.:|:
Yeast   554 -----STSEIKKRELENAKLALYDKV 574

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spag1NP_651514.1 NlpI <229..373 CDD:443815 40/173 (23%)
TPR repeat 229..257 CDD:276809 9/27 (33%)
TPR repeat 262..293 CDD:276809 8/33 (24%)
TPR repeat 298..326 CDD:276809 11/33 (33%)
SWA2NP_010606.1 Ubiq-assoc 138..181 CDD:401184 7/23 (30%)
TPR repeat 374..402 CDD:276809 9/28 (32%)
CpoB 383..496 CDD:441335 28/116 (24%)
TPR repeat 407..441 CDD:276809 8/33 (24%)
TPR repeat 467..495 CDD:276809 11/31 (35%)

Return to query results.
Submit another query.