DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spag1 and TMTC4

DIOPT Version :10

Sequence 1:NP_651514.1 Gene:Spag1 / 43239 FlyBaseID:FBgn0039463 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_001337500.1 Gene:TMTC4 / 84899 HGNCID:25904 Length:818 Species:Homo sapiens


Alignment Length:240 Identity:46/240 - (19%)
Similarity:84/240 - (35%) Gaps:78/240 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   274 HLKLKKYFSAI--------------------SDCQ---ACLQIDPMNIKAHLRMAEAHNAEGKHL 315
            |.|.||..:|:                    |:.|   :.|.:.|:|.|.|..:.:....:|...
Human   512 HTKKKKLIAAVVLGILFINTLRCVLRSGEWRSEEQLFRSALSVCPLNAKVHYNIGKNLADKGNQT 576

  Fly   316 ESLNVYKKLLDFEP---------DNAIAKK----AVEKLTSMLGEVAPSSATRLIIEEIDPPQLK 367
            .::..|::.:...|         .|.:.::    ..|:|.|:..::.|..|...:...|....||
Human   577 AAIRYYREAVRLNPKYVHAMNNLGNILKERNELQEAEELLSLAVQIQPDFAAAWMNLGIVQNSLK 641

  Fly   368 TSEPKKEAEKSEPTVVKKPEPVVSAKKPPPIKDYDL-------------------AELVKP-NRM 412
            ..|   .||:|..|.:|.       ::..|...|:|                   |.::|| :.:
Human   642 RFE---AAEQSYRTAIKH-------RRKYPDCYYNLGRLYADLNRHVDALNAWRNATVLKPEHSL 696

  Fly   413 VKSNLVSAAEALGNKMQASKGGAPKKPQSPPMTPKETLLRLPQDN 457
            ..:|::...:..||..||...|            :|.|..:|.|:
Human   697 AWNNMIILLDNTGNLAQAEAVG------------REALELIPNDH 729

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spag1NP_651514.1 NlpI <229..373 CDD:443815 25/134 (19%)
TPR repeat 229..257 CDD:276809
TPR repeat 262..293 CDD:276809 8/41 (20%)
TPR repeat 298..326 CDD:276809 4/27 (15%)
TMTC4NP_001337500.1 TMTC_DUF1736 369..443 CDD:462468
TPR 552..763 CDD:440225 39/200 (20%)
TPR repeat 559..587 CDD:276809 4/27 (15%)
TPR repeat 592..622 CDD:276809 4/29 (14%)
TPR repeat 627..655 CDD:276809 9/30 (30%)
TPR repeat 661..687 CDD:276809 3/25 (12%)
TPR repeat 695..723 CDD:276809 7/39 (18%)
NrfG 713..>815 CDD:443378 7/29 (24%)
TPR repeat 728..758 CDD:276809 1/2 (50%)
TPR repeat 763..791 CDD:276809
Blue background indicates that the domain is not in the aligned region.

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