DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spag1 and TPR12

DIOPT Version :10

Sequence 1:NP_651514.1 Gene:Spag1 / 43239 FlyBaseID:FBgn0039463 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_177936.1 Gene:TPR12 / 844148 AraportID:AT1G78120 Length:530 Species:Arabidopsis thaliana


Alignment Length:240 Identity:53/240 - (22%)
Similarity:102/240 - (42%) Gaps:45/240 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   115 NLPSVRKLSKIDLEKESKT--EKPKPAPKATSPSNTKNKEARIKSTDYRKWDKYDPDEEILRMDL 177
            :||.....:|.:|..:|.|  ..||..|:.::.::::.|    ||...:...|..|||.      
plant    34 SLPEKDHRAKDNLSSKSSTTVTNPKILPRKSTDTSSQPK----KSDSQKPQQKPKPDEN------ 88

  Fly   178 NEERDQEQREKIISNHSKSVT--TDKLQSERDSL-------YERLQAQLKNLSQLEKEQFAER-- 231
            :..:..|...|...:..||::  :.:.:|:|.||       ..:.|..:|......|.::..:  
plant    89 HPRKSSESARKSSDSARKSISSGSSRTESKRFSLNGVMGNIIVKPQPAVKTDVTQTKSRWEGKPV 153

  Fly   232 -HRL-------RGNESFKAKEYENAIEEYNCSIIYDPENAVHAYNNRAVAHLKLKKYFSAISDCQ 288
             |||       .|||.:....:..|:..|..:|..||:...: ::|::.|.:.|.:...|...|:
plant   154 NHRLDPETLKKMGNEEYCRGRFGQALVFYERAISADPKTPTY-WSNKSAALISLGRLLEASDACE 217

  Fly   289 ACLQIDPMNIKAHLRMAEA-------------HNAEGKHLESLNV 320
            ..|:::|...:||.|:|..             :|..||:.|:.::
plant   218 EALRLNPTYERAHQRLASLQLRLGEVEKALCHYNEAGKYTETKHI 262

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spag1NP_651514.1 NlpI <229..373 CDD:443815 26/115 (23%)
TPR repeat 229..257 CDD:276809 8/37 (22%)
TPR repeat 262..293 CDD:276809 6/30 (20%)
TPR repeat 298..326 CDD:276809 8/36 (22%)
TPR12NP_177936.1 LapB 155..385 CDD:442196 26/109 (24%)
TPR repeat 159..187 CDD:276809 5/27 (19%)
TPR repeat 192..222 CDD:276809 6/30 (20%)
TPR repeat 227..253 CDD:276809 5/25 (20%)
TPR 303..>486 CDD:440225
TPR repeat 427..457 CDD:276809
TPR repeat 462..486 CDD:276809
Blue background indicates that the domain is not in the aligned region.

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