DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spag1 and Hop2

DIOPT Version :10

Sequence 1:NP_651514.1 Gene:Spag1 / 43239 FlyBaseID:FBgn0039463 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_176461.1 Gene:Hop2 / 842572 AraportID:AT1G62740 Length:571 Species:Arabidopsis thaliana


Alignment Length:520 Identity:101/520 - (19%)
Similarity:187/520 - (35%) Gaps:157/520 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 KKKSLLERYNIPIHYLDFAHVEKCTNAREMEKIVQILRSGEEGHYPDLQRCA-EEKLKALKPDSK 68
            |..|.|...::.::..|.| ||..:...|::...:.|:||    ..|.:..| ..:..|..|...
plant    71 KGYSRLGAAHLGLNQFDEA-VEAYSKGLEIDPSNEGLKSG----LADAKASASRSRASAPNPFGD 130

  Fly    69 LFRYEEQIKQSTDLDKTELKPILDWTDAIKTKDNALNELKKVKQNLNL----------------- 116
            .|:..|...:.|....|  :.:|...|.:    |.:.|:::...||||                 
plant   131 AFQGPEMWSKLTADPST--RGLLKQPDFV----NMMKEIQRNPSNLNLYLQDQRVMQALGVLLNI 189

  Fly   117 -----------------PSVRKLSKIDLEKESKTE-KPKPAPKATSPSNTK---NKEARIKSTDY 160
                             .:|....:.::||:.|.| :|:|.|:.......|   .||..:.:..|
plant   190 QIRTQQAGDDMEIGEEEMAVPSRKEPEVEKKRKPEPEPEPEPEFGEEKQKKLKAQKEKELGNAAY 254

  Fly   161 RKWD---------------------------------KYDPDEEILRMDLNEERDQEQR------ 186
            :|.|                                 ||  ||.|...|...||.:|.|      
plant   255 KKKDFETAIQHYSTAMEIDDEDISYITNRAAVHLEMGKY--DECIKDCDKAVERGRELRSDYKMV 317

  Fly   187 ---------------------EKIISNHSKSVTTDKLQSERDSLYERLQAQLKNLSQLEKEQF-- 228
                                 |.:|..:.|::|    :.......:||....:...:||::::  
plant   318 AKALTRKGTALGKMAKVSKDYEPVIQTYQKALT----EHRNPETLKRLNEAERAKKELEQQEYYD 378

  Fly   229 ---AERHRLRGNESFKAKEYENAIEEYNCSIIYDPENAVHAYNNRAVAHLKLKKYFSAISDCQAC 290
               .:..|.:||:.||.::|.:|:..|..:|..:|::. .||:|||..:.||......:.|.:.|
plant   379 PNIGDEEREKGNDFFKEQKYPDAVRHYTEAIKRNPKDP-RAYSNRAACYTKLGAMPEGLKDAEKC 442

  Fly   291 LQIDPMNIKAHLR-------MAEAHNAEGKHLESLNVYKKLLDFEPDNAIAKKAVEKLTSML--- 345
            :::||..:|.:.|       |.|..||       :..|:|.|:.:|:|......|::....:   
plant   443 IELDPTFLKGYSRKGAVQFFMKEYDNA-------METYQKGLEHDPNNQELLDGVKRCVQQINKA 500

  Fly   346 --GEVAPSSATRLIIEEIDPPQLKT--------------SEPKKEAEK--SEPTVVKKPEPVVSA 392
              |::.|........:.:..|:::.              .|....|:|  ..|.::.|.:.::|:
plant   501 NRGDLTPEELKERQAKGMQDPEIQNILTDPVMRQVLSDLQENPAAAQKHMQNPMIMNKIQKLISS 565

  Fly   393  392
            plant   566  565

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spag1NP_651514.1 NlpI <229..373 CDD:443815 37/169 (22%)
TPR repeat 229..257 CDD:276809 8/27 (30%)
TPR repeat 262..293 CDD:276809 9/30 (30%)
TPR repeat 298..326 CDD:276809 8/34 (24%)
Hop2NP_176461.1 PLN03088 1..>102 CDD:215568 8/31 (26%)
TPR repeat 2..30 CDD:276809
TPR repeat 35..65 CDD:276809
TPR repeat 70..98 CDD:276809 7/27 (26%)
STI1 134..188 CDD:436075 11/59 (19%)
TPR repeat 243..271 CDD:276809 5/27 (19%)
TPR 247..276 CDD:197478 3/28 (11%)
TPR 271..548 CDD:440225 56/290 (19%)
TPR repeat 276..306 CDD:276809 6/31 (19%)
TPR repeat 318..349 CDD:276809 3/30 (10%)
TPR repeat 386..410 CDD:276809 8/23 (35%)
TPR repeat 415..445 CDD:276809 9/30 (30%)
TPR repeat 450..478 CDD:276809 8/34 (24%)
Blue background indicates that the domain is not in the aligned region.

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