DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spag1 and TPR6

DIOPT Version :10

Sequence 1:NP_651514.1 Gene:Spag1 / 43239 FlyBaseID:FBgn0039463 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_176141.1 Gene:TPR6 / 842214 AraportID:AT1G58450 Length:164 Species:Arabidopsis thaliana


Alignment Length:130 Identity:36/130 - (27%)
Similarity:56/130 - (43%) Gaps:23/130 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   224 EKEQFAERHRLRGNESFKAKEYENAIEEYN----CSIIYDPENA--------------VHAYNNR 270
            ||.:.|.|.:..||..:|.::||.|.::||    |.     ||.              |..:.|.
plant     5 EKIEAANRKKEEGNLLYKTQKYERAAKKYNKAAECI-----ENGKFEGGDEKQVKALRVSCFLNG 64

  Fly   271 AVAHLKLKKYFSAISDCQACLQIDPMNIKAHLRMAEAHNAEGKHLESLNVYKKLLDFEPDNAIAK 335
            |...||||.:...|..|...|.|:..|:||..|.|:::...|..:.:.....:.|:.:|:|...|
plant    65 AACSLKLKNFLETIVLCSEVLDIEFQNVKALYRRAQSYIEVGDLISAEMDINRALEADPENREVK 129

  Fly   336  335
            plant   130  129

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spag1NP_651514.1 NlpI <229..373 CDD:443815 34/125 (27%)
TPR repeat 229..257 CDD:276809 11/31 (35%)
TPR repeat 262..293 CDD:276809 11/44 (25%)
TPR repeat 298..326 CDD:276809 5/27 (19%)
TPR6NP_176141.1 3a0801s09 5..>115 CDD:273380 32/114 (28%)
TPR repeat 10..38 CDD:276809 10/27 (37%)
TPR repeat 57..87 CDD:276809 10/29 (34%)
TPR repeat 92..120 CDD:276809 5/27 (19%)

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