DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spag1 and TPR5

DIOPT Version :10

Sequence 1:NP_651514.1 Gene:Spag1 / 43239 FlyBaseID:FBgn0039463 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_176039.2 Gene:TPR5 / 842097 AraportID:AT1G56440 Length:476 Species:Arabidopsis thaliana


Alignment Length:385 Identity:97/385 - (25%)
Similarity:148/385 - (38%) Gaps:121/385 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 DKTE-----LKPILDWTDAIKTKDNALNELKKVKQNLNLPSVRKLSKIDLEKESKTEKPKPAPKA 142
            |:|:     ...:.||..::|.||      ||:||                              
plant    11 DQTQDFQGFFNDLQDWELSLKDKD------KKIKQ------------------------------ 39

  Fly   143 TSPSNTKNKEARIKSTDYRKWDKYDPDEEILRMDLNEERDQEQREKIISNHSKSVTTDKLQSERD 207
             .|:|:.|                 |..|..|...:.:.|..::.:.|.:.|.|:..:.|..   
plant    40 -QPANSSN-----------------PSSETFRPSGSGKYDFAKKYRSIRDLSSSLIGESLLD--- 83

  Fly   208 SLYERLQAQLKNLSQLEKEQFAERHRLRGNESFKAKEYENAIEEYNCSIIYDPENAVHAYNNRAV 272
                         |..||||        |||.||.|::..||:.|:.||...| ||| .|.|||:
plant    84 -------------SSSEKEQ--------GNEFFKQKKFNEAIDCYSRSIALSP-NAV-TYANRAM 125

  Fly   273 AHLKLKKYFSAISDCQACLQIDPMNIKAHLRMAEAHNAEGKHLESLNVYKKLLDFEPDNAIAKKA 337
            |:||:|:|..|..||...|.:|...|||:.|.|.|....|...|:....:..|..||::...||.
plant   126 AYLKIKRYREAEVDCTEALNLDDRYIKAYSRRATARKELGMIKEAKEDAEFALRLEPESQELKKQ 190

  Fly   338 VEKLTSMLGEVAPSSAT---RLIIEEIDPPQLKTSEPKKEAEKSEPTVVKKPEPVVSAKKPPPIK 399
            ...:.|:|.:.....||   :...:|:    ||||...|:.:|.:..:..||..:|:        
plant   191 YADIKSLLEKEIIEKATGAMQSTAQEL----LKTSGLDKKIQKPKTEMTSKPVTLVA-------- 243

  Fly   400 DYDLAELVKPNRMVKSNLVSAAEALGNKM-------QASKGGAPKKP------QSPPMTP 446
                    |.||.:...::.:.|:.|.|:       :.||.|:.|.|      .|..:||
plant   244 --------KTNRDIVQPVLGSNESSGKKLIENIQPEEKSKEGSMKIPAITEILDSKKVTP 295

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spag1NP_651514.1 NlpI <229..373 CDD:443815 51/146 (35%)
TPR repeat 229..257 CDD:276809 10/27 (37%)
TPR repeat 262..293 CDD:276809 16/30 (53%)
TPR repeat 298..326 CDD:276809 8/27 (30%)
TPR5NP_176039.2 TPR repeat 88..112 CDD:276809 13/31 (42%)
TPR 91..>218 CDD:440225 47/132 (36%)
TPR repeat 116..146 CDD:276809 16/30 (53%)
TPR repeat 151..179 CDD:276809 8/27 (30%)
RPAP3_C 353..441 CDD:464012
Blue background indicates that the domain is not in the aligned region.

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