DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spag1 and TMTC1

DIOPT Version :10

Sequence 1:NP_651514.1 Gene:Spag1 / 43239 FlyBaseID:FBgn0039463 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_001354804.1 Gene:TMTC1 / 83857 HGNCID:24099 Length:944 Species:Homo sapiens


Alignment Length:380 Identity:74/380 - (19%)
Similarity:137/380 - (36%) Gaps:103/380 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 REMEKIVQILRSGEEGHYPDLQRCAEEKLKALKPDSK--------------LFRYEEQIKQSTDL 82
            |.:..:..:|:|.|:         .||.:..||...|              |...:|:.|::.::
Human   611 RALFNLGNLLKSQEK---------KEEAITLLKDSIKYGPEFADAYSSLASLLAEQERFKEAEEI 666

  Fly    83 DKTELKPILDWTD-----AIKTKDNALNE--LKKVKQNLNL-PS-----------VRKLSKIDLE 128
            .:|.:|...|.:|     .:...|..|.|  :...:|.:.| ||           .|.|.:..:.
Human   667 YQTGIKNCPDSSDLHNNYGVFLVDTGLPEKAVAHYQQAIKLSPSHHVAMVNLGRLYRSLGENSMA 731

  Fly   129 KESKTEKPKPAPKA--TSP-----SNTKNKEARIKSTDYRKWDKYDPDEEILRMDLNE---ERDQ 183
            :|......:.|.||  .||     .||...|..::.  |::.....|.:..||:.|.:   ...|
Human   732 EEWYKRALQVAHKAEILSPLGALYYNTGRYEEALQI--YQEAAALQPSQRELRLALAQVLAVMGQ 794

  Fly   184 EQREKIISNHSKSVTTDKLQSER--DSLYERLQAQLKNLSQLEK---------EQFAERHRLRGN 237
            .:..:.::||..|..|..|:..|  .::|.:.:...|.|..::|         :..:|....:||
Human   795 TKEAEKMTNHIVSEETGCLECYRLLSAIYSKQENHDKALDAIDKALQLKPKDPKVISELFFTKGN 859

  Fly   238 ESFKAKEYENAIEEYNCSIIYDPENAVHAYNNRAVAHLKLKKYFSAISDCQACLQIDPMNIKAHL 302
            :..:....:.|.|.|..::..:|:.|....|...:.|:|                          
Human   860 QLREQNLLDKAFESYRVAVQLNPDQAQAWMNMGGIQHIK-------------------------- 898

  Fly   303 RMAEAHNAEGKHLESLNVYKKLLDFEPDNAIAKKAVEKLTSM---LGEVAPSSAT 354
                     ||::.:...|::.|...||:.:.|:.:.||..:   |.||.....|
Human   899 ---------GKYVSARAYYERALQLVPDSKLLKENLAKLDRLEKRLQEVREKDQT 944

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spag1NP_651514.1 NlpI <229..373 CDD:443815 24/129 (19%)
TPR repeat 229..257 CDD:276809 6/27 (22%)
TPR repeat 262..293 CDD:276809 4/30 (13%)
TPR repeat 298..326 CDD:276809 3/27 (11%)
TMTC1NP_001354804.1 TMTC_DUF1736 353..427 CDD:462468
TPR repeat 545..573 CDD:276809
LapB 549..801 CDD:442196 40/200 (20%)
TPR repeat 578..605 CDD:276809
TPR repeat 610..638 CDD:276809 8/35 (23%)
TPR repeat 644..672 CDD:276809 4/27 (15%)
TPR repeat 677..707 CDD:276809 5/29 (17%)
LapB 685..940 CDD:442196 57/291 (20%)
TPR repeat 712..740 CDD:276809 3/27 (11%)
TPR repeat 745..771 CDD:276809 7/27 (26%)
TPR repeat 778..808 CDD:276809 6/29 (21%)
TPR repeat 814..841 CDD:276809 5/26 (19%)
TPR repeat 846..880 CDD:276809 6/33 (18%)
TPR repeat 885..913 CDD:276809 7/62 (11%)
Blue background indicates that the domain is not in the aligned region.

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