back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment Spag1 and AT5G63200

DIOPT Version :10

Sequence 1:	NP_651514.1	Gene:	Spag1 / 43239	FlyBaseID:	FBgn0039463	Length:	469	Species:	Drosophila melanogaster
Sequence 2:	NP_201125.2	Gene:	AT5G63200 / 836441	AraportID:	AT5G63200	Length:	649	Species:	Arabidopsis thaliana

Alignment Length:	372	Identity:	62/372 - (16%)
Similarity:	132/372 - (35%)	Gaps:	106/372 - (28%)

- Green bases have known domain annotations that are detailed below.

  Fly     9 LLERYNIPIHYLDFAHVEKC--------------TNAREMEK---------IVQILRSGEE---- 46
            :|:.:|.|...:::|....|              .:|.|.:|         ::..|||..:
plant   292 VLKDHNHPAALINYAAELLCKHSSTVAGAGANGGADASEDQKAPMNVAKECLLAALRSDPKSAHA 356

  Fly    47 -----------GHYPDLQRCAEEKLKALKPDSKLFRYEEQIKQSTDLDKTELKPILDWTDAIKTK 100
                       |.:....:|.|:..| |.|:....|:...:::..|.::::     |.:|.:...
plant   357 WVNLANSYYMMGDHRSSSKCLEKAAK-LDPNCMATRFAVAVQRIKDAERSQ-----DASDQLSWA 415

  Fly   101 DNALNELKKVKQNLNLPSVRKLSKIDL----------------EKESKTEKPKPAPKATSPSNTK 149
            .|.:..:  :::..::|....::...|                ::...||..:.|..:...:.|:
plant   416 GNEMASV--IREGESVPIDPPIAWAGLAMAHKAQHEIAAAFVADRNELTEMEERAVYSLKQAVTE 478

  Fly   150 NKEARIK----------STDYRKWDKYDPDEEILRMDLNEERDQEQREKIISNHSKSVTTDKLQS 204
            :.|..::          |..|:...||      |:..:...|:...   ..||...|:......|
plant   479 DPEDAVRWHQLGLHSLCSQQYKLSQKY------LKAAVGRSRECSY---AWSNLGISLQLSDEHS 534

  Fly   205 ERDSLYER---------LQAQLKNLSQLEKEQFAERHRLRGNESFKAKEYENAIEEYNCSIIYDP 260
            |.:.:|:|         ..|.|.||..|.:::               |:||.:...::.::...|
plant   535 EAEEVYKRALTVSKEDQAHAILSNLGNLYRQK---------------KQYEVSKAMFSKALELKP 584

  Fly   261 ENAVHAYNNRAVAHLKLKKYFSAISDCQACLQIDPMNIKAHLRMAEA 307
            ..| .||||..:..:..:::..|.|..:..|:.|.:...|...:.:|
plant   585 GYA-PAYNNLGLVFVAERRWEEAKSCFEKSLEADSLLDAAQSNLLKA 630

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.