DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spag1 and Phox3

DIOPT Version :10

Sequence 1:NP_651514.1 Gene:Spag1 / 43239 FlyBaseID:FBgn0039463 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_197536.1 Gene:Phox3 / 832158 AraportID:AT5G20360 Length:809 Species:Arabidopsis thaliana


Alignment Length:442 Identity:87/442 - (19%)
Similarity:177/442 - (40%) Gaps:113/442 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 KPDSKLFRYEEQIKQSTDLDKTELKPILDWTDAIKTKDNALNELKKV-----KQNLNLPSVRKLS 123
            |.:.::...:.:..||..:|.::::.:.|....::|.|:.:::::.:     |.......|.|:.
plant     3 KQNEEISTDDAETSQSQLVDDSKVETLDDCVSKVETLDDCVSKVETLDDCVSKAETLADCVSKVE 67

  Fly   124 KIDLEKESKTEKPKPAPKATSPSNTKNKEARIKSTDYRKWDKYDPDEEILRMDLNEERDQEQREK 188
            .:|                       :..:::|:.|       |...::..:|     |...:.:
plant    68 TLD-----------------------DCVSKVKTLD-------DCVSKVENLD-----DCVPKVE 97

  Fly   189 IISNHSKSV-TTDKLQSERDSLYERLQAQLKNLSQLEKEQFAERHRLRGNESFKAKEYENAIEEY 252
            .:.:....| |.|...||.::|.:.:     :.:|..||:        ||:.|:.::|:.|:.:|
plant    98 TLDDCVPKVETLDDCVSEVETLDDCV-----SKAQGLKEE--------GNKLFQKRDYDGAMFKY 149

  Fly   253 NCSIIYDPENAV---HAYNNRAVAHLKLK--KYFSAISDCQACLQIDPMNIKAHLRMAEAHNAEG 312
            ..:|...|::.|   |...|.|..:::|:  ::..||.:|...|.:.|.:.||.|:.|..:.|..
plant   150 GEAIKILPKDHVEVSHVRANVASCYMQLEPGEFAKAIHECDLALSVTPDHNKALLKRARCYEALN 214

  Fly   313 K---HLESLNVYKKLLDFEPDNAIAKKAVEKLTSML---GEVAPSSATRLIIEEIDP----PQL- 366
            |   .|..:.:..||   :|.|.:|.:.||||...|   |....:|...|..:.::|    |.. 
plant   215 KLDLALRDVCMVSKL---DPKNPMASEIVEKLKRTLESKGLRINNSVIELPPDYVEPVGASPAAL 276

  Fly   367 ----------KTSEPKKEAEKSEPTVVKKPEPVVSAKKPPPIKDYDLAELVKPNRMVKSNLVS-- 419
                      ||.:..:..||||..                      .|.|:|.:  |:|:::  
plant   277 WAKLGKVRVKKTKKSNQVEEKSEGE----------------------GEDVEPEK--KNNVLAEK 317

  Fly   420 AAEALGNKM---QASKGGAPKKPQSPPMTPKETLLRLPQDNLNNSNKLLIQE 468
            ..|.:..|:   |:.|.....|.|...:. :|.||.:..:::|...|.:..:
plant   318 GKEKIKMKVKGKQSDKRSDTSKEQEKVII-EEELLVIGVEDVNKDVKFVYSD 368

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spag1NP_651514.1 NlpI <229..373 CDD:443815 42/169 (25%)
TPR repeat 229..257 CDD:276809 6/27 (22%)
TPR repeat 262..293 CDD:276809 9/35 (26%)
TPR repeat 298..326 CDD:276809 9/30 (30%)
Phox3NP_197536.1 NlpI <126..>237 CDD:443815 32/121 (26%)
TPR repeat 126..154 CDD:276809 9/35 (26%)
TPR repeat 159..195 CDD:276809 9/35 (26%)
PB1 361..436 CDD:214770 1/8 (13%)

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