DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spag1 and TPR13

DIOPT Version :10

Sequence 1:NP_651514.1 Gene:Spag1 / 43239 FlyBaseID:FBgn0039463 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_196571.1 Gene:TPR13 / 830873 AraportID:AT5G10090 Length:594 Species:Arabidopsis thaliana


Alignment Length:326 Identity:61/326 - (18%)
Similarity:116/326 - (35%) Gaps:108/326 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   108 KKVKQNLNLPSVRKLSKIDLEKESKTEKPKPAPKA--------------TSPSNTKNKEARIKST 158
            :|:::|..||.       .:|.:::.::|...|.:              ..|||  |.:..::..
plant    68 RKLQENKVLPE-------PIEVQNQVQRPVSKPSSHQYPNNNQLGSNGNNQPSN--NNQGPVQQQ 123

  Fly   159 DYRKWDKYDPDE------EILRMDLNEERDQEQREKIISNHSKSV-------------------T 198
            ..||    .|.|      |:..|.::.::.:.....::...|.:|                   |
plant   124 QARK----VPREAIGLSGELESMIIDNQKAKGNNGSMVRASSSNVMLFGNLGNLKQPGPSGGNQT 184

  Fly   199 T----------------DKLQSERDSLYERLQAQLKNLSQ-------LEKEQFAERHRLRGNESF 240
            |                ..|:.||.:...::.|. .|..|       :......|..::.|||.:
plant   185 TIQNNGYGNTGGGYGVKKTLEEERKTSVAQIPAS-NNQDQSGSLCRAISTRMDPETLKIMGNEDY 248

  Fly   241 KAKEYENAIEEYNCSIIYDPENAVHAYNNRAVAHLKLKKYFSAISDCQACLQIDPMNIKAH---- 301
            |...:..|:..|..:|..||:.|.:. :|::.|...|.:...|:.:|:..::|||...:||    
plant   249 KNGNFAEALALYEAAISIDPKKASYR-SNKSAALTALGRILEAVFECREAIRIDPHYHRAHHRLA 312

  Fly   302 ---LRMAEAHN-----------------AEGK----HLESLNVYKKLLDFEPDNAIAKKAVEKLT 342
               ||:.|..|                 ::.|    ||......|:|.|:   |.:.|:....:|
plant   313 NLYLRLGEVENSIYHFKHAGPEADQEDISKAKMVQTHLNKCTEAKRLRDW---NTLIKETENTIT 374

  Fly   343 S 343
            :
plant   375 T 375

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spag1NP_651514.1 NlpI <229..373 CDD:443815 34/143 (24%)
TPR repeat 229..257 CDD:276809 7/27 (26%)
TPR repeat 262..293 CDD:276809 6/30 (20%)
TPR repeat 298..326 CDD:276809 11/55 (20%)
TPR13NP_196571.1 TPR repeat 237..265 CDD:276809 7/27 (26%)
TPR repeat 270..300 CDD:276809 6/30 (20%)
LapB 280..568 CDD:442196 22/99 (22%)
TPR repeat 305..331 CDD:276809 6/25 (24%)
TPR 432..>586 CDD:440225
TPR repeat 473..499 CDD:276809
TPR repeat 504..534 CDD:276809
TPR repeat 539..563 CDD:276809
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.