DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spag1 and SRFR1

DIOPT Version :10

Sequence 1:NP_651514.1 Gene:Spag1 / 43239 FlyBaseID:FBgn0039463 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_195462.3 Gene:SRFR1 / 829901 AraportID:AT4G37460 Length:1052 Species:Arabidopsis thaliana


Alignment Length:440 Identity:98/440 - (22%)
Similarity:166/440 - (37%) Gaps:138/440 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   123 SKIDLEKESKTEKPKPAPKATSPSNTKNKE---ARIKST-----DYR--------KWDKYDPDEE 171
            :||.: |.||......|....|..:.|||:   |||..|     |:|        ....|.....
plant   255 NKISI-KSSKMSHKAEARCGISDESRKNKKYTIARISGTHSISVDFRLSRGIAQVNEGNYTKAIS 318

  Fly   172 ILRMDLNEERD--------------QEQREKIISNHSKSVTTDKLQSE--------RDSLYERLQ 214
            |....|.||..              |.:.|..|::.:|::.::...||        |.:|.|.::
plant   319 IFDKVLKEEPTYPEALIGRGTAYAFQRELESAIADFTKAIQSNPAASEAWKRRGQARAALGEYVE 383

  Fly   215 AQLKNLSQLEKEQFAERH-----RLRGNESFKAKEYENAIEEYNCSIIYDPEN------------ 262
            |    :..|.|....|.:     ..||..:||:|::..|:::.:..:..:.:|            
plant   384 A----VEDLTKALVFEPNSPDVLHERGIVNFKSKDFTAAVKDLSICLKQEKDNKSAYTYLGLAFA 444

  Fly   263 AVHAYNNRAVAHLK--------------LKKYFSAISD-CQA--C----LQIDPMNIKA-HLR-- 303
            ::..|.....||||              |.:::..::| |:|  |    ||:|....|| |||  
plant   445 SLGEYKKAEEAHLKSIQLDSNYLEAWLHLAQFYQELADHCKALECIEQVLQVDNRVWKAYHLRGL 509

  Fly   304 ------------------------------MAEAHNAEGKHLESLNVYKKLLDFEPDNAIAKKAV 338
                                          ....::|.|::.:::..|...:|.|.| |:.|..:
plant   510 VFHGLGEHRKAIQELSIGLSIENTIECLYLRGSCYHAVGEYRDAVKDYDATVDVELD-AVEKFVL 573

  Fly   339 EKLTSMLGEVAPSSATRLIIE--------EIDPP----QLKTSEPKKEAEKSEPTVVKKPEPVVS 391
            :.|.....|:|..:|:::..|        :|||.    ..|...||...||    |.::| |:..
plant   574 QCLAFYQKELALYTASKVSSEFLCFDIDGDIDPMFKEYWCKRLHPKNVCEK----VYRQP-PLRE 633

  Fly   392 AKKPPPIKDYDLAELVKPNRMVKSNLVSAAEALGNKMQAS-KGGAPKKPQ 440
            :.|...:|..||| :.|.    |:|::..|:.:|.::|.. .|..|.|.|
plant   634 SLKKGKLKKQDLA-ITKQ----KANILRFADLIGKRIQYDCPGFLPNKRQ 678

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spag1NP_651514.1 NlpI <229..373 CDD:443815 44/226 (19%)
TPR repeat 229..257 CDD:276809 7/32 (22%)
TPR repeat 262..293 CDD:276809 12/63 (19%)
TPR repeat 298..326 CDD:276809 8/60 (13%)
SRFR1NP_195462.3 3a0801s09 <19..492 CDD:273380 51/241 (21%)
TPR repeat 39..68 CDD:276809
TPR repeat 73..101 CDD:276809
TPR repeat 268..296 CDD:276809 9/27 (33%)
TPR repeat 297..325 CDD:276809 4/27 (15%)
TPR 324..524 CDD:440225 41/203 (20%)
TPR repeat 330..360 CDD:276809 4/29 (14%)
TPR repeat 365..392 CDD:276809 8/30 (27%)
TPR repeat 399..427 CDD:276809 6/27 (22%)
TPR repeat 432..462 CDD:276809 6/29 (21%)
TPR repeat 467..495 CDD:276809 5/27 (19%)
NlpI <501..>585 CDD:443815 15/84 (18%)
TPR repeat 501..529 CDD:276809 5/27 (19%)
TPR repeat 534..558 CDD:276809 2/23 (9%)
Blue background indicates that the domain is not in the aligned region.

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