DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spag1 and Phox4

DIOPT Version :10

Sequence 1:NP_651514.1 Gene:Spag1 / 43239 FlyBaseID:FBgn0039463 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_001320111.1 Gene:Phox4 / 829338 AraportID:AT4G32070 Length:782 Species:Arabidopsis thaliana


Alignment Length:258 Identity:56/258 - (21%)
Similarity:109/258 - (42%) Gaps:43/258 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   211 ERLQAQLKNLSQLEKEQFAERHRLRGNESFKAKEYENAIEEYNCSIIYDPENAVH-AYNNRAVA- 273
            |.::..:....:|::|         ||:.|:.:::|.|:..::.::...|::.:. ||...::| 
plant    42 EDMEIFISRALELKEE---------GNKLFQKRDHEGAMLSFDKALKLLPKDHIDVAYLRTSMAS 97

  Fly   274 ---HLKLKKYFSAISDCQACLQIDPMNIKAHLRMAEAHNAEGKHLESLNVYKKLLDFEPDNAIAK 335
               .:.|.:|.:|||:|...|:..|...||.:|.:..:.|..|...:....:.:|:.||.|..|.
plant    98 CYMQMGLGEYPNAISECNLALEASPRYSKALVRRSRCYEALNKLDYAFRDARIVLNMEPGNVSAN 162

  Fly   336 KAVEKLTSML--------------GEVAPSSATRL--IIEEIDPPQLKTSEPKK-------EAEK 377
            :..:::..:|              .:|.|..|.||  |::|    :|:.|:.||       |.:.
plant   163 EIFDRVKKVLVDKGIDVDEMEKDFVDVQPVCAARLKKIVKE----RLRKSKKKKKSGGKDEELKS 223

  Fly   378 SEPTVVKKPEPVVSAKKPPPIKD--YDLAELVKPNRMVKSNLVSAAEALGNKMQASKGGAPKK 438
            .:..||.|.:......||...|.  .|:...:...|..|.....:.:....|...:|.|..:|
plant   224 PKVVVVDKGDEAEGRNKPKEEKSDKSDIDGKIGGKREEKKTSFKSDKGQKKKSGGNKAGEERK 286

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spag1NP_651514.1 NlpI <229..373 CDD:443815 37/164 (23%)
TPR repeat 229..257 CDD:276809 5/27 (19%)
TPR repeat 262..293 CDD:276809 10/35 (29%)
TPR repeat 298..326 CDD:276809 5/27 (19%)
Phox4NP_001320111.1 TPR 40..>161 CDD:440225 29/127 (23%)
TPR repeat 51..79 CDD:276809 7/36 (19%)
TPR repeat 84..120 CDD:276809 10/35 (29%)
TPR repeat 125..152 CDD:276809 5/26 (19%)
PB1 317..393 CDD:214770
P5CR_dimer 474..553 CDD:464294
TPR repeat 504..534 CDD:276809
FAT 535..>625 CDD:396714
TPR_11 545..578 CDD:315977
TPR repeat 566..589 CDD:276809
Blue background indicates that the domain is not in the aligned region.

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