DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spag1 and Hop3

DIOPT Version :10

Sequence 1:NP_651514.1 Gene:Spag1 / 43239 FlyBaseID:FBgn0039463 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_001031620.1 Gene:Hop3 / 826849 AraportID:AT4G12400 Length:558 Species:Arabidopsis thaliana


Alignment Length:537 Identity:113/537 - (21%)
Similarity:194/537 - (36%) Gaps:183/537 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 TNAREMEKIVQILRSGEEGHYPDLQRCAE-----EKLKALKPD-SK-----------LFRYEEQI 76
            |.|..:.....||.|.....|..|.|..|     :|...|||| ||           |.:::|.:
plant    26 TEAINLSPTNHILYSNRSASYASLHRYEEALSDAKKTIELKPDWSKGYSRLGAAFIGLSKFDEAV 90

  Fly    77 ---KQSTDLD------------------KTELKPILD-------W---------------TDAIK 98
               |:..::|                  .::..|.:|       |               .|.:|
plant    91 DSYKKGLEIDPSNEMLKSGLADASRSRVSSKSNPFVDAFQGKEMWEKLTADPGTRVYLEQDDFVK 155

  Fly    99 TKDNALNELKKVKQNLNL----PSVRKL------------SKIDLEKESKTEKPKPAPKATSPSN 147
            |    :.|:::...||||    ..|.|.            |..|.|.:...|:.:|.|:......
plant   156 T----MKEIQRNPNNLNLYMKDKRVMKALGVLLNVKFGGSSGEDTEMKEADERKEPEPEMEPMEL 216

  Fly   148 T-------KNKEARIK-----STDYRKWD------------KYDPDEEI----------LRM--- 175
            |       :.||..:|     :..|:|.|            :.| ||:|          |.|   
plant   217 TEEERQKKERKEKALKEKGEGNVAYKKKDFGRAVEHYTKAMELD-DEDISYLTNRAAVYLEMGKY 280

  Fly   176 -------DLNEERDQEQR---------------------------EKIISNHSKSVTTDKLQSER 206
                   |...||.:|.|                           |..|....|::|..:   ..
plant   281 EECIEDCDKAVERGRELRSDFKMIARALTRKGSALVKMARCSKDFEPAIETFQKALTEHR---NP 342

  Fly   207 DSLYERLQAQLKNLSQLEKEQF-----AERHRLRGNESFKAKEYENAIEEYNCSIIYDPENAVHA 266
            |:| ::|....|...:||::::     ||..|.:||..||.::|..|::.|:.:|..:| |.|.|
plant   343 DTL-KKLNDAEKVKKELEQQEYFDPTIAEEEREKGNGFFKEQKYPEAVKHYSEAIKRNP-NDVRA 405

  Fly   267 YNNRAVAHLKLKKYFSAISDCQACLQIDPMNIKAHLRMAEAHNAEGKHLESLNVYKKLLDFEPDN 331
            |:|||..:.||......:.|.:.|:::||...|.:.|.........::.:::..|::.|..:|.|
plant   406 YSNRAACYTKLGALPEGLKDAEKCIELDPSFTKGYSRKGAIQFFMKEYDKAMETYQEGLKHDPKN 470

  Fly   332 AI----AKKAVEKLT-SMLGEVAPSSATRLIIEEIDPPQLKT--SEP------------KKEAEK 377
            ..    .::.||::. :..|::.|........:.:..|:::.  |:|            .|.|::
plant   471 QEFLDGVRRCVEQINKASRGDLTPEELKERQAKAMQDPEVQNILSDPVMRQVLVDFQENPKAAQE 535

  Fly   378 --SEPTVVKKPEPVVSA 392
              ..|.|:.|.:.:|||
plant   536 HMKNPMVMNKIQKLVSA 552

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spag1NP_651514.1 NlpI <229..373 CDD:443815 38/162 (23%)
TPR repeat 229..257 CDD:276809 10/27 (37%)
TPR repeat 262..293 CDD:276809 11/30 (37%)
TPR repeat 298..326 CDD:276809 3/27 (11%)
Hop3NP_001031620.1 TPR repeat 2..30 CDD:276809 2/3 (67%)
TPR 8..>113 CDD:440225 20/86 (23%)
TPR repeat 35..65 CDD:276809 8/29 (28%)
TPR repeat 70..98 CDD:276809 5/27 (19%)
STI1 131..185 CDD:436075 11/57 (19%)
TPR repeat 234..258 CDD:276809 3/23 (13%)
TPR 258..533 CDD:440225 60/280 (21%)
TPR repeat 263..293 CDD:276809 4/29 (14%)
TPR repeat 305..336 CDD:276809 3/30 (10%)
TPR repeat 369..397 CDD:276809 10/27 (37%)
TPR repeat 402..432 CDD:276809 10/29 (34%)
TPR repeat 437..465 CDD:276809 3/27 (11%)

Return to query results.
Submit another query.