DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spag1 and TSK

DIOPT Version :10

Sequence 1:NP_651514.1 Gene:Spag1 / 43239 FlyBaseID:FBgn0039463 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_188503.2 Gene:TSK / 821404 AraportID:AT3G18730 Length:1311 Species:Arabidopsis thaliana


Alignment Length:524 Identity:100/524 - (19%)
Similarity:194/524 - (37%) Gaps:134/524 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 HVEKCTNARE-MEKIVQILRSGEEGHYPDLQRCAEEKLKALKPDSKLFRYEEQIKQSTDLDKTEL 87
            |::....|.: :||.....:.|...|...|:  :|:..:|::...|.|:...::.|..    .|.
plant    92 HLQLAEEANDTVEKQRACTQLGRTYHEMFLK--SEDDCEAIQSAKKYFKKAMELAQIL----KEK 150

  Fly    88 KPILDWTDAIKTKDNALNELKKVKQNLNLP-SVRKLSKIDLEKESKTE-KPKPAPKATSPSNTKN 150
            .|..:.:..::...||.|.:..:..:|:.| :.|.:.|..|:...:.| :...|.::....|..|
plant   151 PPPGESSGFLEEYINAHNNIGMLDLDLDNPEAARTILKKGLQICDEEEVREYDAARSRLHHNLGN 215

  Fly   151 KEARIKSTDYRKWDKYDPDEEILRMDLN---------------------EERDQEQREKIISNHS 194
            ....::|     ||:   .::.:.||:|                     ..:.|:..:.::. :.
plant   216 VFMALRS-----WDE---AKKHIEMDINICHKINHVQGEAKGYINLAELHNKTQKYIDALLC-YG 271

  Fly   195 KSVTTDKLQSERDSLYERLQ-------AQLKNLSQLEKEQF------AERHRLRGNESFKAKEYE 246
            |:.:..|...:..:|.|:::       ..:|.:.:|.:|:.      ||....:|.    ::|.:
plant   272 KASSLAKSMQDESALVEQIEHNTKIVKKSMKVMEELREEELMLKKLSAEMTDAKGT----SEERK 332

  Fly   247 NAIEEYNC--SIIYDPENAVHAYNNRAVAHLKLKKYFSAISDCQAC------------------L 291
            :.::...|  |:| |..:.|.|:    :.||:..|....||| :.|                  |
plant   333 SMLQVNACLGSLI-DKSSMVFAW----LKHLQYSKRKKKISD-ELCDKEKLSDAFMIVGESYQNL 391

  Fly   292 QIDPMNIKAHLRMAEAH----NAEGKHLESLNVYK----------KLLDFEPDNAIAKKAVEKLT 342
            :....::|..:|..|.|    |.||:.|..:|:..          .|..:|....||.||  .|.
plant   392 RNFRKSLKWFIRSYEGHEAIGNLEGQALAKINIGNGLDCIGEWTGALQAYEEGYRIALKA--NLP 454

  Fly   343 SM---------------LGEVAPSSATRLIIEEIDPPQLKTSEPKKEAEKSEPTVVK-------- 384
            |:               .|....:|..:..|:     .||.||..::||.|......        
plant   455 SIQLSALEDIHYIHMMRFGNAQKASELKETIQ-----NLKESEHAEKAECSTQDECSETDSEGHA 514

  Fly   385 -----KPEPVVSAKKPPPIKDYDLAELVKPNRMVKSNLVSAAEALGNKMQASKGGAPKKPQSPPM 444
                 :|....|.:.|..::...||:|.:.|..|.  |:|..:. |.::...|..:.|:......
plant   515 NVSNDRPNACSSPQTPNSLRSERLADLDEANDDVP--LISFLQP-GKRLFKRKQVSGKQDADTDQ 576

  Fly   445 TPKE 448
            |.|:
plant   577 TKKD 580

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spag1NP_651514.1 NlpI <229..373 CDD:443815 42/192 (22%)
TPR repeat 229..257 CDD:276809 6/29 (21%)
TPR repeat 262..293 CDD:276809 10/48 (21%)
TPR repeat 298..326 CDD:276809 10/41 (24%)
TSKNP_188503.2 TPR_12 24..98 CDD:315987 1/5 (20%)
TPR repeat 26..58 CDD:276809
TPR repeat 68..94 CDD:276809 1/1 (100%)
TPR 72..>293 CDD:440225 37/215 (17%)
TPR repeat 105..143 CDD:276809 8/39 (21%)
TPR repeat 164..192 CDD:276809 7/27 (26%)
TPR repeat 206..236 CDD:276809 7/37 (19%)
TPR repeat 247..273 CDD:276809 1/26 (4%)
leucine-rich repeat 811..830 CDD:275380
leucine-rich repeat 831..861 CDD:275380
RNA1 <843..1076 CDD:444072
leucine-rich repeat 867..887 CDD:275380
leucine-rich repeat 900..925 CDD:275380
leucine-rich repeat 926..953 CDD:275380
leucine-rich repeat 954..984 CDD:275380
leucine-rich repeat 985..1007 CDD:275380
leucine-rich repeat 1008..1037 CDD:275380
RNA1 <1031..>1166 CDD:444072
leucine-rich repeat 1038..1059 CDD:275380
leucine-rich repeat 1060..1094 CDD:275380
leucine-rich repeat 1095..1123 CDD:275380
leucine-rich repeat 1124..1151 CDD:275380
Blue background indicates that the domain is not in the aligned region.

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