DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spag1 and TTL2

DIOPT Version :10

Sequence 1:NP_651514.1 Gene:Spag1 / 43239 FlyBaseID:FBgn0039463 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_001319556.1 Gene:TTL2 / 820724 AraportID:AT3G14950 Length:730 Species:Arabidopsis thaliana


Alignment Length:468 Identity:95/468 - (20%)
Similarity:162/468 - (34%) Gaps:156/468 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 SGEEGHYPDLQRCAEEKLKALKPDSKLFRYEEQIKQSTDLDKTELKPILDWTDAIKTKDNALNEL 107
            :|..||.|.:.|         ||||                   ::|:   ..|.|:|.:.|:..
plant    69 TGHAGHTPPVTR---------KPDS-------------------VQPV---PSASKSKSSNLSSA 102

  Fly   108 KKVKQNLNLPS-----------VRKLSKIDLEKESKT-----EKPKPAPKATSPSNTKNKEARIK 156
            .|..::...||           .|..|:...:..:||     .....|...|.||..|:..:..:
plant   103 AKSSKSSTTPSSAAQFGGSYSPARAQSRASSQVGAKTGNIIRPSSNSASVTTKPSGNKSSVSSKQ 167

  Fly   157 STDYRKWDKYDPDEEILRMDLNEERDQEQ----------REKIISNHSKSVTTDKLQSERDSLYE 211
            |..........|..::....:.:|:.:..          ...||..::.|.....:.|:..|:  
plant   168 SLKILPAGNLVPSGKVQITGMTQEKPRSMVLGPGAKSYGYGSIIRGNNLSPVKPTMMSDSSSV-- 230

  Fly   212 RLQAQLKNLSQLEKEQFA-----------ERHRLRGNESFKAKEYENAIEEYNCSIIYDPENAVH 265
             |...|.|.|....:.:.           |..:..|||.|:...:..|::.|:.:|...|.||.:
plant   231 -LPLTLSNNSTGGPDAYTSWKIAIYGSNPEEVKRFGNEMFRKGCFAEALKLYDRAIELSPSNATY 294

  Fly   266 AYNNRAVAHLKLKKYFSAISDCQACLQIDPMNIKAH-------LRMAEAHNAEGKHLESLNVYKK 323
             ::|||.|...|.:...|:::|:..:::||...:||       ||:....|| |.||.|:.    
plant   295 -HSNRAAALSSLGQIGEAVNECEIAIKLDPNFARAHHRLASLLLRLGYVDNA-GIHLYSVE---- 353

  Fly   324 LLDFEP-DNAIAKKAVEKLTSMLGEVAPSSATRLIIEEIDPPQLKTSEPKKEAEKSEPTVVKKPE 387
                || |..:.|                     :::::|....|.:..::..|.|         
plant   354 ----EPLDPTVVK---------------------MLQQVDKHLNKCTYARRRGEWS--------- 384

  Fly   388 PVVSAKKPPPIKDYDLAELVKPNRMVKSNLVSAAEALGNKMQASKGGAPKKPQSPPMTPKETLLR 452
             :|            |.|            ||||.|         .||...||. .|...|.||:
plant   385 -IV------------LTE------------VSAAIA---------SGADSSPQL-AMCKAEALLK 414

  Fly   453 LPQDNLNNSNKLL 465
            |.:  |:::.::|
plant   415 LLR--LDDAQRVL 425

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spag1NP_651514.1 NlpI <229..373 CDD:443815 36/162 (22%)
TPR repeat 229..257 CDD:276809 7/38 (18%)
TPR repeat 262..293 CDD:276809 9/30 (30%)
TPR repeat 298..326 CDD:276809 10/34 (29%)
TTL2NP_001319556.1 TPR repeat 258..286 CDD:276809 7/27 (26%)
LapB 274..593 CDD:442196 52/229 (23%)
TPR repeat 291..321 CDD:276809 9/30 (30%)
TPR repeat 402..430 CDD:276809 9/27 (33%)
TPR repeat 529..559 CDD:276809
TPR repeat 564..588 CDD:276809
TRX_family 635..725 CDD:239245
Blue background indicates that the domain is not in the aligned region.

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