DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spag1 and RPAP3

DIOPT Version :10

Sequence 1:NP_651514.1 Gene:Spag1 / 43239 FlyBaseID:FBgn0039463 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_078880.2 Gene:RPAP3 / 79657 HGNCID:26151 Length:665 Species:Homo sapiens


Alignment Length:314 Identity:89/314 - (28%)
Similarity:146/314 - (46%) Gaps:41/314 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 SKLFRYEEQIKQSTDLDKTELKPILDWTDAIKTKDNALNELKKVKQNLNLPSVRKLSKIDLEKES 131
            :|....:.|:||:.:..:..::.:.:|...||.||..|.....|.:. |||.:|..:    .::.
Human     5 NKAIELQLQVKQNAEELQDFMRDLENWEKDIKQKDMELRRQNGVPEE-NLPPIRNGN----FRKK 64

  Fly   132 KTEKPKPAPKATSPSNTKNKEARIKSTDYRKWDKYDPDEEILRMDLNEERDQEQREKIISNHSKS 196
            |..|.|.:.|.|...||||   ||||.||..|.|.|.|..:..:|    :|....|.:       
Human    65 KKGKAKESSKKTREENTKN---RIKSYDYEAWAKLDVDRILDELD----KDDSTHESL------- 115

  Fly   197 VTTDKLQSERDSLYERLQAQLKNLSQLEKEQFAERHRLRGNESFKAKEYENAIEEYNCSIIYDPE 261
              :.:.:||.|.::...|..|     :.||        :||:.||..:|:.||:.|...:..||.
Human   116 --SQESESEEDGIHVDSQKAL-----VLKE--------KGNKYFKQGKYDEAIDCYTKGMDADPY 165

  Fly   262 NAVHAYNNRAVAHLKLKKYFSAISDCQACLQIDPMNIKAHLRMAEAHNAEGKHLESLNVYKKLLD 326
            |.| ...|||.|:.:|||:..|.|||...:.::....||:.|...|..|..|..|:...|:::|:
Human   166 NPV-LPTNRASAYFRLKKFAVAESDCNLAVALNRSYTKAYSRRGAARFALQKLEEAKKDYERVLE 229

  Fly   327 FEPDNAIAKKAVEKLTSMLGEVA---PSSATRLIIE--EIDPPQLKTSEPKKEA 375
            .||:|..|...:.|::..|....   |..|. ::|:  |.:..|::..:.|::|
Human   230 LEPNNFEATNELRKISQALASKENSYPKEAD-IVIKSTEGERKQIEAQQNKQQA 282

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spag1NP_651514.1 NlpI <229..373 CDD:443815 43/148 (29%)
TPR repeat 229..257 CDD:276809 8/27 (30%)
TPR repeat 262..293 CDD:276809 13/30 (43%)
TPR repeat 298..326 CDD:276809 8/27 (30%)
RPAP3NP_078880.2 TPR 1 8..41 8/32 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 37..82 14/49 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 109..129 4/28 (14%)
TPR 126..372 CDD:440225 49/172 (28%)
TPR 2 133..166 13/45 (29%)
TPR repeat 133..161 CDD:276809 11/40 (28%)
TPR repeat 166..196 CDD:276809 13/30 (43%)
TPR 3 168..200 12/32 (38%)
TPR 4 201..234 11/32 (34%)
TPR repeat 201..229 CDD:276809 8/27 (30%)
TPR 5 282..315 1/1 (100%)
TPR repeat 286..310 CDD:276809
TPR repeat 315..345 CDD:276809
TPR 6 317..349
TPR 7 350..383
TPR repeat 350..377 CDD:276809
RPAP3_C 546..636 CDD:464012
Blue background indicates that the domain is not in the aligned region.

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