DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spag1 and stub1

DIOPT Version :10

Sequence 1:NP_651514.1 Gene:Spag1 / 43239 FlyBaseID:FBgn0039463 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_001072347.1 Gene:stub1 / 779800 XenbaseID:XB-GENE-966697 Length:310 Species:Xenopus tropicalis


Alignment Length:212 Identity:54/212 - (25%)
Similarity:97/212 - (45%) Gaps:35/212 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   224 EKEQFAERHRLRGNESFKAKEYENAIEEYNCSIIYDPENAVHAYNNRAVAHLKLKKYFSAISDCQ 288
            ||...|:..:.:||..|.|::|:.|:..|:.:|..:...||: |.|||:.:||:::...|::||:
 Frog    27 EKSVSAQELKEQGNRLFVARKYQEAVSCYSKAITRNSSIAVY-YTNRALCYLKMQQLDKALADCK 90

  Fly   289 ACLQIDPMNIKAHLRMAEAHNAEGKHLESL-------NVYK-KLLDFEPD----NAIAKK----A 337
            ..|::|..::|||..:.:.......:.|::       |:.| :.|:|..|    ..||||    :
 Frog    91 HALELDCQSVKAHFFLGQCQMELENYDEAIANLQRAYNLAKEQRLNFGDDIPSALRIAKKKRWNS 155

  Fly   338 VEKLTSMLGEVAPSSATRLII----EEIDPPQLKTSEPKKEAEKSE---PTVVKKPE-------- 387
            :|:..........|..|:||:    .|::..:.|..|...|..:|.   .:|..|.:        
 Frog   156 IEERRINQENELHSYLTKLILAEKERELEEAKRKHQEDSVEESRSRALLSSVASKHDKHLAEMEE 220

  Fly   388 ---PVVSAKKPPPIKDY 401
               .|...:|...|.||
 Frog   221 LFSQVDEKRKKRDIPDY 237

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spag1NP_651514.1 NlpI <229..373 CDD:443815 43/163 (26%)
TPR repeat 229..257 CDD:276809 8/27 (30%)
TPR repeat 262..293 CDD:276809 12/30 (40%)
TPR repeat 298..326 CDD:276809 6/35 (17%)
stub1NP_001072347.1 NlpI <32..151 CDD:443815 34/119 (29%)
TPR repeat 32..60 CDD:276809 8/27 (30%)
TPR repeat 65..95 CDD:276809 12/30 (40%)
TPR repeat 100..127 CDD:276809 4/26 (15%)
CHIP_TPR_N 148..232 CDD:436460 17/83 (20%)
RING-Ubox_CHIP 234..304 CDD:438316 3/4 (75%)

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