DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spag1 and spag1b

DIOPT Version :9

Sequence 1:NP_651514.1 Gene:Spag1 / 43239 FlyBaseID:FBgn0039463 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_001070789.1 Gene:spag1b / 768178 ZFINID:ZDB-GENE-061013-512 Length:591 Species:Danio rerio


Alignment Length:372 Identity:99/372 - (26%)
Similarity:179/372 - (48%) Gaps:53/372 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 NIPIHYLDFAHVEKCTNAREMEKIVQILRSGEEGHYPDLQRCAEEKLKALKPDSKLFRYEEQIKQ 78
            ::|:.:||::.::.|::.:::|:|:::||||:||.||.|....|.:::.|.|.|...|.|.....
Zfish    11 SVPVEHLDYSFIQSCSDLKQLEQILRVLRSGQEGVYPHLIGFCERRIEMLNPKSAELRTENHPHT 75

  Fly    79 STDLDKTELKPILD----WTDAIKTKDNALNELKKVKQNLNLPSVRKLSKI-DLEKESKTEKPKP 138
            :....:.|.:.|.:    |..:::..:.||...........:|.||...:: ...:|.||.|...
Zfish    76 AACYTEEEWRSITEDLQVWERSVRMTEAALMRSSIFSSEECVPPVRSSHRVLQTNQEKKTVKTSC 140

  Fly   139 APKATSPSNTKNKEARIKSTDYRKWDKYDPDEEILRMDLNEERDQEQREKIISNHSKSVTTDKLQ 203
            ||:                 .|..||::|.|...            ..|.:.:..:.:....::|
Zfish   141 APR-----------------PYTDWDRFDVDSAC------------AGESVRNAPAAAAVCPEVQ 176

  Fly   204 SERDSLYERLQAQLKNLSQLEKEQFAERHRLRGNESFKAKEYENAIEEYNCSIIYDPENAVHAYN 268
             :|.|....|.||       ||:..|.|.:.:|||::::::||.|::.|..|:......||  :|
Zfish   177 -QRLSSCTALTAQ-------EKQTAALREKDKGNEAYRSRDYEEALDYYCRSLSLASSAAV--FN 231

  Fly   269 NRAVAHLKLKKYFSAISDCQACLQIDPMNIKAHLRMAEAHNAEGKHLESLNVYKKLLDFEPDNAI 333
            |||...::|:::.:|:|||.|.||::|.||||.||.|..|...|...||.:..:.:|..:|.|..
Zfish   232 NRAQTLIRLQQWPAALSDCDAVLQLEPHNIKALLRRATVHKHLGHQQESHDDLRAVLQIQPQNKT 296

  Fly   334 AKKAVEKLTSM-LGEVAPSSATRLIIEEIDPPQLKTSEPKKEAEKSE 379
            |.|.:..::|. ..:...|:..|::|:|:        |.::|...||
Zfish   297 ALKLLADVSSTDPPQQTRSTGRRILIQEV--------EEEEEGAHSE 335

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spag1NP_651514.1 TPR_11 229..295 CDD:290150 24/65 (37%)
TPR repeat 229..257 CDD:276809 10/27 (37%)
TPR repeat 262..293 CDD:276809 13/30 (43%)
TPR_11 266..329 CDD:290150 25/62 (40%)
TPR 266..297 CDD:197478 13/30 (43%)
TPR repeat 298..326 CDD:276809 10/27 (37%)
spag1bNP_001070789.1 TPR_11 194..258 CDD:290150 24/65 (37%)
TPR repeat 198..222 CDD:276809 8/23 (35%)
TPR repeat 226..256 CDD:276809 13/31 (42%)
TPR_16 233..294 CDD:290168 24/60 (40%)
TPR repeat 261..289 CDD:276809 10/27 (37%)
TPR repeat 483..513 CDD:276809
TPR_11 486..548 CDD:290150
TPR_1 486..517 CDD:278916
TPR repeat 518..546 CDD:276809
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1124
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 113 1.000 Inparanoid score I4833
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1070087at2759
OrthoFinder 1 1.000 - - FOG0008026
OrthoInspector 1 1.000 - - otm26431
orthoMCL 1 0.900 - - OOG6_105718
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
87.770

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