DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spag1 and Rpap3

DIOPT Version :10

Sequence 1:NP_651514.1 Gene:Spag1 / 43239 FlyBaseID:FBgn0039463 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_082279.1 Gene:Rpap3 / 71919 MGIID:1277218 Length:660 Species:Mus musculus


Alignment Length:315 Identity:91/315 - (28%)
Similarity:137/315 - (43%) Gaps:44/315 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 SKLFRYEEQIKQSTDLDKTELKPILDWTDAIKTKDNALNELKKVKQNLNLPSVRKLSKIDLEKES 131
            ||....:.|:|.:.:..:..::.:..|...:|.||..|.....|.:. |||.:|   ..:..|:.
Mouse     5 SKAVELQLQVKHNAEELQDFMRDLEHWEKDMKEKDLELRRQGGVAEE-NLPPIR---NGNFRKKK 65

  Fly   132 KTEKPKPAPKATSPSNTKNKEARIKSTDYRKWDKYDPDEEILRMDLNEERDQEQREKIISNHSKS 196
            |..|.|.:.:.|...||||   ||||.||..|.|.|.|.      :.:|.|:|.     |.|   
Mouse    66 KKGKAKESSRKTKEENTKN---RIKSYDYDAWAKLDVDR------ILDELDKED-----STH--- 113

  Fly   197 VTTDKLQSERDSLYERLQAQLKNLSQLEKEQFAERHRLRGNESFKAKEYENAIEEYNCSIIYDPE 261
               |.|..|.:|..:.::...:....|::         :||:.||..:|:.|||.|...:..||.
Mouse   114 ---DSLSQESESDEDGIRVDSQKALVLKE---------KGNKYFKQGKYDEAIECYTKGMDADPY 166

  Fly   262 NAVHAYNNRAVAHLKLKKYFSAISDCQACLQIDPMNIKAHLRMAEAHNAEGKHLESLNVYKKLLD 326
            |.| ...|||.|:.:|||:..|.|||...:.:.....||:.|...|..|..|..::...|:|:|:
Mouse   167 NPV-LPTNRASAYFRLKKFAVAESDCNLAIALSRTYTKAYARRGAARFALQKLEDARKDYEKVLE 230

  Fly   327 FEPDNAIAKKAVEKLTSMLGEVAPSSATRLIIEEIDPPQLKTSEPKKEAEKSEPT 381
            .||||..|...:.|:...|...          |...|.....:|.|..|.:|:||
Mouse   231 LEPDNFEATNELRKINQALTSK----------ENSGPGAAAAAESKPAAGESKPT 275

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spag1NP_651514.1 NlpI <229..373 CDD:443815 43/143 (30%)
TPR repeat 229..257 CDD:276809 9/27 (33%)
TPR repeat 262..293 CDD:276809 13/30 (43%)
TPR repeat 298..326 CDD:276809 8/27 (30%)
Rpap3NP_082279.1 TPR 1 8..41 6/32 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 42..83 12/44 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 109..128 7/29 (24%)
TPR 127..>345 CDD:440225 49/169 (29%)
TPR 2 134..167 12/41 (29%)
TPR repeat 134..162 CDD:276809 10/36 (28%)
TPR repeat 167..197 CDD:276809 13/30 (43%)
TPR 3 169..201 12/32 (38%)
TPR 4 202..235 11/32 (34%)
TPR repeat 202..230 CDD:276809 8/27 (30%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 250..283 8/36 (22%)
TPR 5 284..317
TPR repeat 284..312 CDD:276809
PLN03088 295..>430 CDD:215568
TPR repeat 317..347 CDD:276809
TPR 6 319..351
TPR 7 352..385
TPR repeat 352..379 CDD:276809
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 449..485
RPAP3_C 541..631 CDD:464012
Blue background indicates that the domain is not in the aligned region.

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