DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spag1 and Tmtc4

DIOPT Version :10

Sequence 1:NP_651514.1 Gene:Spag1 / 43239 FlyBaseID:FBgn0039463 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_082927.1 Gene:Tmtc4 / 70551 MGIID:1921050 Length:741 Species:Mus musculus


Alignment Length:209 Identity:43/209 - (20%)
Similarity:77/209 - (36%) Gaps:62/209 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   282 SAISDCQACLQIDPMNIKAHLRMAEAHNAEGKHLESLNVYKKLLDFEP---------DNAIAKK- 336
            ||:|.|       |:|.|.|..:.:....:|....::..|::.:...|         .|.:.:: 
Mouse   473 SALSVC-------PLNAKVHYNIGKNLADQGNQTAAIKYYREAVRLNPKYVHAMNNLGNILKERN 530

  Fly   337 ---AVEKLTSMLGEVAPSSATRLIIEEIDPPQLKTSEPKKEAEKSEPTVVKKPEPVVSAKKPPPI 398
               ..|:|.|:..::.|..|...:...|....||..|   |||:|..|.:|.       ::..|.
Mouse   531 ELQEAEELLSLAVQIQPDFAAAWMNLGIVQNSLKRFE---EAEQSYRTAIKH-------RRKYPD 585

  Fly   399 KDYDL-------------------AELVKP-NRMVKSNLVSAAEALGNKMQASKGGAPKKPQSPP 443
            ..|:|                   |.::|| :.:..:|::...:..||..||...|         
Mouse   586 CYYNLGRLYADLNRHVDALNAWRNATVLKPEHSLAWNNMIILLDNTGNLAQAEAVG--------- 641

  Fly   444 MTPKETLLRLPQDN 457
               :|.|..:|.|:
Mouse   642 ---REALQLIPNDH 652

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spag1NP_651514.1 NlpI <229..373 CDD:443815 21/103 (20%)
TPR repeat 229..257 CDD:276809
TPR repeat 262..293 CDD:276809 4/10 (40%)
TPR repeat 298..326 CDD:276809 4/27 (15%)
Tmtc4NP_082927.1 TMTC_DUF1736 292..366 CDD:462468
TPR 475..681 CDD:440225 41/207 (20%)
TPR 1. /evidence=ECO:0000255|PROSITE-ProRule:PRU00339 482..515 5/32 (16%)
TPR repeat 482..510 CDD:276809 4/27 (15%)
TPR repeat 515..545 CDD:276809 4/29 (14%)
TPR 2. /evidence=ECO:0000255|PROSITE-ProRule:PRU00339 516..549 5/32 (16%)
TPR 3. /evidence=ECO:0000255|PROSITE-ProRule:PRU00339 550..583 11/42 (26%)
TPR repeat 550..578 CDD:276809 10/30 (33%)
TPR 4. /evidence=ECO:0000255|PROSITE-ProRule:PRU00339 584..617 6/32 (19%)
TPR repeat 584..610 CDD:276809 3/25 (12%)
TPR 5. /evidence=ECO:0000255|PROSITE-ProRule:PRU00339 618..651 9/44 (20%)
TPR repeat 618..646 CDD:276809 7/39 (18%)
TPR 645..>738 CDD:440225 3/8 (38%)
TPR repeat 651..681 CDD:276809 1/2 (50%)
TPR 6. /evidence=ECO:0000255|PROSITE-ProRule:PRU00339 652..685 0/1 (0%)
TPR 7. /evidence=ECO:0000255|PROSITE-ProRule:PRU00339 686..719
TPR repeat 686..714 CDD:276809
Blue background indicates that the domain is not in the aligned region.

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