DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spag1 and Dnaaf4

DIOPT Version :10

Sequence 1:NP_651514.1 Gene:Spag1 / 43239 FlyBaseID:FBgn0039463 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_080590.3 Gene:Dnaaf4 / 67685 MGIID:1914935 Length:420 Species:Mus musculus


Alignment Length:377 Identity:84/377 - (22%)
Similarity:157/377 - (41%) Gaps:79/377 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MEKEKKKSLLERYNIPIHYLDFAHVEKCTNAREMEKIVQILRSGEEGHYPDLQRCAEEKLKALKP 65
            |::.::||:|:..            ||...|.|.:.:.:  |..:.....::.:..||:.|.:: 
Mouse    96 MQRIREKSILQAQ------------EKAKEATEAKAVAK--REDQRYALGEMMKIEEEERKKIE- 145

  Fly    66 DSKLFRYEEQIKQSTDLDKTELKPILDWTDAIKTKDNALNELKKVKQNLNLPSVRKLSKIDLEKE 130
            |.|    |.:.|::|    :||:.   |.:..|..|......:|.|     |...|.:     :|
Mouse   146 DMK----ENERKKAT----SELEA---WKECQKKADGQKRVQRKEK-----PLEGKQA-----EE 189

  Fly   131 SKTEKPKPAPKATSPSNTKNKEARIKSTDYRKWDKYDPDEEILRMDLNEERDQEQRE-------- 187
            :|..||:..|:...|:..        .|..|.|:...|::      |.|:|....|.        
Mouse   190 TKALKPRGLPRKAPPTRL--------PTRGRNWENIFPEK------LKEDRVPAPRSAGSIQISF 240

  Fly   188 --KIISNHSKSVTTDKLQSERDSLYERLQAQLKNLSQL-------EKEQFAERHRLRGNESFKAK 243
              ::...   ::...::..|.:.|:::.:|:....:.|       |:|:..:..:.:||:.|..:
Mouse   241 TPRVFPT---ALRESQVAEEEEWLHKQAEARRAMSTDLPEFFDLKEEERNPDWLKDKGNKLFATE 302

  Fly   244 EYENAIEEYNCSIIYDPENAVHAYNNRAVAHLKLKKYFSAISDCQACLQI------DPMN--IKA 300
            .|..|::.||.:|..:.:..: .|.|||..|||||....||.|....|::      |..|  :||
Mouse   303 NYLAAVDAYNLAIRLNCKIPL-LYLNRAACHLKLKNLHKAIEDSSKALELLTPPVADNANARMKA 366

  Fly   301 HLRMAEAHNAEGKHLESLNVYKKLLDFEPDNAIAKKAVEKLTSMLGEVAPSS 352
            |:|...|......::|.|..|:..|..:|.|.:.:...||:.:::...|..|
Mouse   367 HVRRGTAFCQLELYVEGLQDYEAALKIDPANTVVQNDAEKIRNIIQGTALKS 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spag1NP_651514.1 NlpI <229..373 CDD:443815 38/132 (29%)
TPR repeat 229..257 CDD:276809 7/27 (26%)
TPR repeat 262..293 CDD:276809 13/30 (43%)
TPR repeat 298..326 CDD:276809 8/27 (30%)
Dnaaf4NP_080590.3 Mediates interaction with ESR1 and STUB1. /evidence=ECO:0000250 7..103 1/6 (17%)
p23_DYX1C1_like 10..87 CDD:107226
PTZ00121 <106..>270 CDD:173412 39/216 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 164..212 13/65 (20%)
3a0801s09 250..>394 CDD:273380 38/144 (26%)
TPR 1 288..321 8/32 (25%)
TPR repeat 288..316 CDD:276809 7/27 (26%)
TPR repeat 321..351 CDD:276809 13/30 (43%)
TPR 2 322..355 13/33 (39%)
TPR repeat 362..392 CDD:276809 8/29 (28%)
TPR 3 364..397 10/32 (31%)
Blue background indicates that the domain is not in the aligned region.

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