DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spag1 and Tomm34

DIOPT Version :9

Sequence 1:NP_651514.1 Gene:Spag1 / 43239 FlyBaseID:FBgn0039463 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_001278084.1 Gene:Tomm34 / 67145 MGIID:1914395 Length:309 Species:Mus musculus


Alignment Length:337 Identity:77/337 - (22%)
Similarity:132/337 - (39%) Gaps:79/337 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 EKIVQILRSGEE----GHYPDLQRCAEEKLKALK------PDSKLFRYEEQ-------------I 76
            :.:.|:..:|.:    |.|.:.....|..|:.|:      |:.:...|..:             |
Mouse     7 DSVEQLRAAGNQNFRNGQYGEASALYERALRLLQARGSADPEEESVLYSNRAACYLKDGNCTDCI 71

  Fly    77 KQSTD---LDKTELKPILDWTDAIKTKDN---ALNELKKVKQNLN-----LPSVRKLSKIDLEKE 130
            |..|.   |....:||:|....|.:..:.   |..:.|.|.|..|     |..:.::::..::..
Mouse    72 KDCTSALALVPFSIKPLLRRASAYEALEKYALAYVDYKTVLQIDNSVASALEGINRITRALMDSL 136

  Fly   131 SKTEKPKPAPKATSPSNTKNKEARIKSTDYRKWDKYDPDEEILRMDLNEERDQEQREKIISNHSK 195
            ....:.|..|....|.:.:           ::|:....|               ..::.....||
Mouse   137 GPEWRLKLPPIPVVPVSAQ-----------KRWNSLPSD---------------NHKETAKTKSK 175

  Fly   196 SVTTDKLQSERDSLYERLQAQLKNLSQLEKEQFAERHRLRGNESFKAKEYENAIEEYNCSIIYDP 260
            ..|..|.:.......||.:|       |::|         ||:..|...::.|||:|:.|::...
Mouse   176 EATATKSRVPSAGDVERAKA-------LKEE---------GNDLVKKGNHKKAIEKYSESLLCSS 224

  Fly   261 -ENAVHAYNNRAVAHLKLKKYFSAISDCQACLQIDPMNIKAHLRMAEAHNAEGKHLESLNVYKKL 324
             |:|  .|:|||:.||.||:|..|:.||...|::|..|:||..|.|:|:.|...:..||:....|
Mouse   225 LESA--TYSNRALCHLVLKQYKEAVKDCTEALKLDGKNVKAFYRRAQAYKALKDYKSSLSDISSL 287

  Fly   325 LDFEPDNAIAKK 336
            |..||.|..|:|
Mouse   288 LQIEPRNGPAQK 299

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spag1NP_651514.1 TPR_11 229..295 CDD:290150 23/66 (35%)
TPR repeat 229..257 CDD:276809 8/27 (30%)
TPR repeat 262..293 CDD:276809 14/30 (47%)
TPR_11 266..329 CDD:290150 25/62 (40%)
TPR 266..297 CDD:197478 14/30 (47%)
TPR repeat 298..326 CDD:276809 9/27 (33%)
Tomm34NP_001278084.1 TPR 3 85..118 9/32 (28%)
TPR repeat 85..113 CDD:276809 7/27 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 158..189 6/45 (13%)
TPR_11 192..257 CDD:290150 27/82 (33%)
TPR 4 193..226 11/48 (23%)
TPR repeat 193..221 CDD:276809 11/43 (26%)
TPR repeat 226..256 CDD:276809 15/31 (48%)
TPR 5 227..260 15/34 (44%)
TPR_1 229..260 CDD:278916 14/30 (47%)
TPR 6 261..294 12/32 (38%)
TPR 1 9..42 7/32 (22%)
TPR repeat 9..37 CDD:276809 5/27 (19%)
TPR_11 10..82 CDD:290150 13/71 (18%)
TPR_11 50..115 CDD:290150 13/64 (20%)
TPR repeat 50..80 CDD:276809 4/29 (14%)
TPR 2 51..84 5/32 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1124
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm43674
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1535
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.840

Return to query results.
Submit another query.