DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spag1 and Ifit1bl1

DIOPT Version :9

Sequence 1:NP_651514.1 Gene:Spag1 / 43239 FlyBaseID:FBgn0039463 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_001095075.1 Gene:Ifit1bl1 / 667373 MGIID:3650685 Length:470 Species:Mus musculus


Alignment Length:334 Identity:65/334 - (19%)
Similarity:121/334 - (36%) Gaps:102/334 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 EKKKSLLERYNIPIHY-LDFAHVEKCTNAREMEKIVQILRSGEEGHYPDLQRCAEEKLKALKPDS 67
            :|.:.:.:.::.|..| |:.|.:: |      |:...:|:.|.: :|.....|..:.|| ::|::
Mouse   124 DKVEKVCKEFSSPFQYRLECAEMD-C------EEGWALLKCGIQ-NYKGAMACFAKALK-VEPEN 179

  Fly    68 KLFR--YEEQIKQSTDLDKTELKPILDWTDAIKTKDNALNELKKVKQNLNLPSVRKLSKIDLEKE 130
            ..:.  |.....:...:|.|.|:. |....::|.:|..|    ||...|.|..:.||.    |.|
Mouse   180 PEYNAGYAVVAYRLDHIDGTSLQH-LQKAVSVKPEDPYL----KVLLALKLQDLHKLE----EAE 235

  Fly   131 SKTEKPKPAPKATSPSNTKNKEARIKSTDY-----RKWDKYDPDEEILRMDLNEERDQEQREKII 190
            ...|:..|               ||.|..|     .|:                     .|.|.:
Mouse   236 KHIEETLP---------------RISSQPYVFGYVAKF---------------------YRRKGL 264

  Fly   191 SNHSKSVTTDKLQSERDSLYERLQAQL---KNLSQLEKEQFAERHRLRGNESFKAKEYENAIEEY 252
            ...:.......||.:..|.:...|..|   |.|.|::|   |...:.||.:..:|          
Mouse   265 VKEALEFLGRALQKQPCSTFLHFQIGLCHKKRLIQIKK---ASNMQPRGEDRKRA---------- 316

  Fly   253 NCSIIYDPENAVHAYNNRAVAHLKLKKYFSAISDCQACLQIDPMNIKAHLRMAEAHNAEGKHLES 317
                    :.::|.    |:.|.|            ..|::.|..:.|::.:||.:..:.:..|:
Mouse   317 --------DQSIHL----AICHFK------------RTLELKPTYVMAYVTLAEMYIEKNQLKEA 357

  Fly   318 LNVYKKLLD 326
            .:.::|||:
Mouse   358 EDNFQKLLN 366

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spag1NP_651514.1 TPR_11 229..295 CDD:290150 9/65 (14%)
TPR repeat 229..257 CDD:276809 4/27 (15%)
TPR repeat 262..293 CDD:276809 5/30 (17%)
TPR_11 266..329 CDD:290150 12/61 (20%)
TPR 266..297 CDD:197478 5/30 (17%)
TPR repeat 298..326 CDD:276809 6/27 (22%)
Ifit1bl1NP_001095075.1 TPR_12 62..132 CDD:290160 1/7 (14%)
TPR repeat 63..94 CDD:276809
TPR repeat 99..129 CDD:276809 1/4 (25%)
TPR repeat 144..174 CDD:276809 7/37 (19%)
TPR_16 153..215 CDD:290168 13/64 (20%)
TPR repeat 179..210 CDD:276809 5/31 (16%)
TPR repeat 215..242 CDD:276809 10/34 (29%)
TPR repeat 249..277 CDD:276809 4/48 (8%)
TPR repeat 282..333 CDD:276809 16/87 (18%)
TPR_11 <323..368 CDD:290150 12/56 (21%)
Capsule_synth <330..>434 CDD:304472 9/37 (24%)
TPR repeat 338..365 CDD:276809 5/26 (19%)
TPR repeat 376..405 CDD:276809
TPR repeat 430..461 CDD:276809
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1124
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.