DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spag1 and Sgta

DIOPT Version :10

Sequence 1:NP_651514.1 Gene:Spag1 / 43239 FlyBaseID:FBgn0039463 Length:469 Species:Drosophila melanogaster
Sequence 2:XP_006241058.3 Gene:Sgta / 64667 RGDID:620815 Length:369 Species:Rattus norvegicus


Alignment Length:129 Identity:50/129 - (38%)
Similarity:73/129 - (56%) Gaps:4/129 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   225 KEQFAERHRLR--GNESFKAKEYENAIEEYNCSIIYDPENAVHAYNNRAVAHLKLKKYFSAISDC 287
            :|..||..||:  |||..|.:.:|.|:..|..:|..:|.|||: :.|||.|:.||..|..|:.||
  Rat   140 EEDSAEAERLKTEGNEQMKLENFEAAVHLYGKAIELNPANAVY-FCNRAAAYSKLGNYVGAVQDC 203

  Fly   288 QACLQIDPMNIKAHLRMAEAHNAEGKHLESLNVYKKLLDFEPDNAIAKKAVEKLTSMLGEVAPS 351
            :..:.|||...||:.||..|.::..||.|::..|||.|:.:|||...|..: |:..:....|||
  Rat   204 ERAIGIDPGYSKAYGRMGLALSSLNKHAEAVAYYKKALELDPDNDTYKSNL-KIAELKLREAPS 266

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spag1NP_651514.1 NlpI <229..373 CDD:443815 49/125 (39%)
TPR repeat 229..257 CDD:276809 11/29 (38%)
TPR repeat 262..293 CDD:276809 13/30 (43%)
TPR repeat 298..326 CDD:276809 11/27 (41%)
SgtaXP_006241058.3 SGTA_dimer 59..118 CDD:465168
TPR 140..>261 CDD:440225 47/122 (39%)
TPR repeat 146..174 CDD:276809 9/27 (33%)
TPR repeat 179..209 CDD:276809 13/30 (43%)
TPR repeat 214..242 CDD:276809 11/27 (41%)
Blue background indicates that the domain is not in the aligned region.

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