DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spag1 and BBS4

DIOPT Version :10

Sequence 1:NP_651514.1 Gene:Spag1 / 43239 FlyBaseID:FBgn0039463 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_149017.2 Gene:BBS4 / 585 HGNCID:969 Length:519 Species:Homo sapiens


Alignment Length:525 Identity:99/525 - (18%)
Similarity:170/525 - (32%) Gaps:171/525 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 EKEKKKS-----LLERYN--IPIHYLDFAHVEKCTNAREMEKIVQILRSGEEGHYPDLQRCAEEK 59
            :|.::|.     :||:.|  |.:||:          .::.|....:::.    ...:.|...|  
Human    19 QKPRQKKAPEFPILEKQNWLIHLHYI----------RKDYEACKAVIKE----QLQETQGLCE-- 67

  Fly    60 LKALKPDSKLFRYEEQIKQSTDLDKT--ELKPILDWTDAIKTKDNALNELKKVKQNLNLPSVRKL 122
             .|:...:.:||.|..|::|.:|.:|  .|.|        ::.||    ||:|.::|.|....| 
Human    68 -YAIYVQALIFRLEGNIQESLELFQTCAVLSP--------QSADN----LKQVARSLFLLGKHK- 118

  Fly   123 SKIDLEKESKTEKPKPAPKATSPSNTKNKEARIKSTDYRKWDKYDPDEEILRMDLNEERDQEQRE 187
                                 :.....|:.|::...|   |:                       
Human   119 ---------------------AAIEVYNEAAKLNQKD---WE----------------------- 136

  Fly   188 KIISNHSKSVTTDKLQSERDSLYERLQAQLKNLSQLEKE-----QFAERHRLRGNESFKAKEYEN 247
               .:|:..|....|:.     :.:.|.||.|...|.:.     ...:.|.|.|       :.:.
Human   137 ---ISHNLGVCYIYLKQ-----FNKAQDQLHNALNLNRHDLTYIMLGKIHLLEG-------DLDK 186

  Fly   248 AIEEYNCSIIYDPENAVHAYNNRAVAHLKLKKYFSAISDCQACLQIDPMNIKAHLRMAEAHNAEG 312
            |||.|..::.:.||| ........:.:|:|..|..|.......|..||.|.||.|.........|
Human   187 AIEVYKKAVEFSPEN-TELLTTLGLLYLQLGIYQKAFEHLGNALTYDPTNYKAILAAGSMMQTHG 250

  Fly   313 KHLESLNVYKKLLDFEPD-----NAIA------KKAVEKLTSM----------------LGEV-- 348
            ....:|..|:.:....|:     |.|.      ||.|..::.:                ||.|  
Human   251 DFDVALTKYRVVACAVPESPPLWNNIGMCFFGKKKYVAAISCLKRANYLAPFDWKILYNLGLVHL 315

  Fly   349 ------------------APSSATRLIIEEIDPPQLKTSEPKKEAEKSEPTVVKKPEPVVS---- 391
                              .|......::..:....|:..|..|.| .:|...:.|..|:|:    
Human   316 TMQQYASAFHFLSAAINFQPKMGELYMLLAVALTNLEDIENAKRA-YAEAVHLDKCNPLVNLNYA 379

  Fly   392 ------AKKPPPIKDYDLAE----LVKPNRMVK--SNLVSAAEALGNKMQASKGGAPKKPQSPPM 444
                  .:|...:..|...|    |:|.|..::  |.:|..|:.||..:|..:.....||...|.
Human   380 VLLYNQGEKKNALAQYQEMEKKVSLLKDNSSLEFDSEMVEMAQKLGAALQVGEALVWTKPVKDPK 444

  Fly   445 TPKET 449
            :..:|
Human   445 SKHQT 449

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spag1NP_651514.1 NlpI <229..373 CDD:443815 36/190 (19%)
TPR repeat 229..257 CDD:276809 7/27 (26%)
TPR repeat 262..293 CDD:276809 6/30 (20%)
TPR repeat 298..326 CDD:276809 6/27 (22%)
BBS4NP_149017.2 Required for localization to centrosomes 1..66 10/60 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..25 1/5 (20%)
TPR repeat 36..61 CDD:276809 5/38 (13%)
TPR 1 67..100 11/43 (26%)
TPR repeat 68..95 CDD:276809 8/26 (31%)
LapB 71..332 CDD:442196 62/336 (18%)
Interaction with PCM1. /evidence=ECO:0000269|PubMed:15107855 101..337 54/303 (18%)
TPR repeat 101..129 CDD:276809 9/53 (17%)
TPR repeat 134..164 CDD:276809 9/63 (14%)
TPR repeat 169..196 CDD:276809 7/33 (21%)
TPR repeat 202..229 CDD:276809 4/26 (15%)
TPR repeat 236..264 CDD:276809 6/27 (22%)
Spy 250..>446 CDD:443119 36/196 (18%)
TPR repeat 270..298 CDD:276809 5/27 (19%)
TPR repeat 303..333 CDD:276809 3/29 (10%)
Required for localization to centrosomes 338..519 24/113 (21%)
TPR repeat 338..365 CDD:276809 5/27 (19%)
TPR repeat 372..397 CDD:276809 4/24 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 440..519 2/10 (20%)

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