DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spag1 and BBS4

DIOPT Version :9

Sequence 1:NP_651514.1 Gene:Spag1 / 43239 FlyBaseID:FBgn0039463 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_149017.2 Gene:BBS4 / 585 HGNCID:969 Length:519 Species:Homo sapiens


Alignment Length:525 Identity:99/525 - (18%)
Similarity:170/525 - (32%) Gaps:171/525 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 EKEKKKS-----LLERYN--IPIHYLDFAHVEKCTNAREMEKIVQILRSGEEGHYPDLQRCAEEK 59
            :|.::|.     :||:.|  |.:||:          .::.|....:::.    ...:.|...|  
Human    19 QKPRQKKAPEFPILEKQNWLIHLHYI----------RKDYEACKAVIKE----QLQETQGLCE-- 67

  Fly    60 LKALKPDSKLFRYEEQIKQSTDLDKT--ELKPILDWTDAIKTKDNALNELKKVKQNLNLPSVRKL 122
             .|:...:.:||.|..|::|.:|.:|  .|.|        ::.||    ||:|.::|.|....| 
Human    68 -YAIYVQALIFRLEGNIQESLELFQTCAVLSP--------QSADN----LKQVARSLFLLGKHK- 118

  Fly   123 SKIDLEKESKTEKPKPAPKATSPSNTKNKEARIKSTDYRKWDKYDPDEEILRMDLNEERDQEQRE 187
                                 :.....|:.|::...|   |:                       
Human   119 ---------------------AAIEVYNEAAKLNQKD---WE----------------------- 136

  Fly   188 KIISNHSKSVTTDKLQSERDSLYERLQAQLKNLSQLEKE-----QFAERHRLRGNESFKAKEYEN 247
               .:|:..|....|:.     :.:.|.||.|...|.:.     ...:.|.|.|       :.:.
Human   137 ---ISHNLGVCYIYLKQ-----FNKAQDQLHNALNLNRHDLTYIMLGKIHLLEG-------DLDK 186

  Fly   248 AIEEYNCSIIYDPENAVHAYNNRAVAHLKLKKYFSAISDCQACLQIDPMNIKAHLRMAEAHNAEG 312
            |||.|..::.:.||| ........:.:|:|..|..|.......|..||.|.||.|.........|
Human   187 AIEVYKKAVEFSPEN-TELLTTLGLLYLQLGIYQKAFEHLGNALTYDPTNYKAILAAGSMMQTHG 250

  Fly   313 KHLESLNVYKKLLDFEPD-----NAIA------KKAVEKLTSM----------------LGEV-- 348
            ....:|..|:.:....|:     |.|.      ||.|..::.:                ||.|  
Human   251 DFDVALTKYRVVACAVPESPPLWNNIGMCFFGKKKYVAAISCLKRANYLAPFDWKILYNLGLVHL 315

  Fly   349 ------------------APSSATRLIIEEIDPPQLKTSEPKKEAEKSEPTVVKKPEPVVS---- 391
                              .|......::..:....|:..|..|.| .:|...:.|..|:|:    
Human   316 TMQQYASAFHFLSAAINFQPKMGELYMLLAVALTNLEDIENAKRA-YAEAVHLDKCNPLVNLNYA 379

  Fly   392 ------AKKPPPIKDYDLAE----LVKPNRMVK--SNLVSAAEALGNKMQASKGGAPKKPQSPPM 444
                  .:|...:..|...|    |:|.|..::  |.:|..|:.||..:|..:.....||...|.
Human   380 VLLYNQGEKKNALAQYQEMEKKVSLLKDNSSLEFDSEMVEMAQKLGAALQVGEALVWTKPVKDPK 444

  Fly   445 TPKET 449
            :..:|
Human   445 SKHQT 449

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spag1NP_651514.1 TPR_11 229..295 CDD:290150 15/65 (23%)
TPR repeat 229..257 CDD:276809 7/27 (26%)
TPR repeat 262..293 CDD:276809 6/30 (20%)
TPR_11 266..329 CDD:290150 14/62 (23%)
TPR 266..297 CDD:197478 7/30 (23%)
TPR repeat 298..326 CDD:276809 6/27 (22%)
BBS4NP_149017.2 Required for localization to centrosomes 1..66 10/60 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..25 1/5 (20%)
TPR_11 <18..400 CDD:330823 85/474 (18%)
TPR repeat 36..61 CDD:276809 5/38 (13%)
TPR 1 67..100 11/43 (26%)
TPR repeat 68..95 CDD:276809 8/26 (31%)
Interaction with PCM1. /evidence=ECO:0000269|PubMed:15107855 101..337 54/303 (18%)
TPR repeat 101..129 CDD:276809 9/53 (17%)
TPR repeat 134..164 CDD:276809 9/63 (14%)
TPR repeat 169..196 CDD:276809 7/33 (21%)
TPR repeat 202..229 CDD:276809 4/26 (15%)
TPR repeat 236..264 CDD:276809 6/27 (22%)
TPR repeat 270..298 CDD:276809 5/27 (19%)
TPR repeat 303..333 CDD:276809 3/29 (10%)
Required for localization to centrosomes 338..519 24/113 (21%)
TPR repeat 338..365 CDD:276809 5/27 (19%)
TPR repeat 372..397 CDD:276809 4/24 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 440..519 2/10 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1124
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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