DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spag1 and kdm6a

DIOPT Version :9

Sequence 1:NP_651514.1 Gene:Spag1 / 43239 FlyBaseID:FBgn0039463 Length:469 Species:Drosophila melanogaster
Sequence 2:XP_005167851.1 Gene:kdm6a / 569277 ZFINID:ZDB-GENE-081105-56 Length:1452 Species:Danio rerio


Alignment Length:641 Identity:124/641 - (19%)
Similarity:208/641 - (32%) Gaps:220/641 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 KEKKKSLLERYNIP-------IHYLDFAH--VEKC-TNAREMEKIVQILR--------SGEEGHY 49
            ||..:|||:..|:|       :..|.:.|  ||:. ..|.:....:|.|:        ||:..::
Zfish   242 KEAYESLLQTENLPAQVKATTLQQLGWMHHTVEQLGDKANKNSYAIQCLQKSLEADPNSGQSWYF 306

  Fly    50 PDLQRCAEEKLKALKPDSKLFRYEEQIKQS------------------------------TDLDK 84
              |.||..   ...|.......|.:.|.:|                              ..||.
Zfish   307 --LGRCYS---SIGKVQDAFISYRQSIDKSEASADTWCSIGVLYQQQNQPMDALQAYICAVQLDH 366

  Fly    85 TELKPILDW----------TDAIKTKDNALNELKKVKQNLNLPSVRKLSK------IDLEKESKT 133
            :.....:|.          .||||...||...    |...|:|::....|      .:|::.|..
Zfish   367 SHAAAWMDLGTLYESCNQPQDAIKCYINATCS----KSCSNIPALTARIKCLQAQLCNLQQGSLP 427

  Fly   134 EKPKPAPKATS------PSNTKNKEARIKSTDYRKWDKYDPDEE-------------ILRMDLNE 179
            .|.|..|....      |:...:::..:.:|..:...|.....|             :|.....:
Zfish   428 SKSKMLPSIEEAWSLPIPAELTSRQGALNTTQQQTTCKAHQSNEAQSQIPSQSLPPHVLSGQTED 492

  Fly   180 ERDQEQREKIIS---NHSKSVTTD---------KLQSERDSLYERLQ--------AQLKNLSQLE 224
            :....::::..|   |.|.|.|.|         .|..::..|.|:|:        .||:.|.|||
Zfish   493 QSSPAKKKRTTSPARNSSDSWTNDPGHHQISNWSLTPQKLQLLEQLRNNRANLKPVQLQMLEQLE 557

  Fly   225 KE----QFAERHRLRGNESFKAKEYENAIEEYNCSIIYDP--ENAVHAYNNRAVA----HLKLKK 279
            |:    |..::.||            ||:.:...|:...|  ::::...:|...:    |:.|.:
Zfish   558 KQLSLMQQNQQTRL------------NAMGQIRPSVSNGPVADSSLPTNSNSTPSPHHPHIALSR 610

  Fly   280 YFSAISDCQA--------------CL------QIDPMNI-KAHL-------------RMAEAHNA 310
            ..||::.|.|              |.      ..|.::: ..||             :.|..||.
Zfish   611 TPSALTRCAAQPIANGPVPASPVPCSTAGTLGNTDAVSVGNNHLPGSGSNGNVPYLRQNALPHNC 675

  Fly   311 -------------EGKHLESLNVYKKLLDFEPDNAIAKKAVEKLTSMLGEVAPSSATRLIIEEID 362
                         :.:|:.|....:|    .|.:..|....|:..|..|...||.|.    ....
Zfish   676 TTPTSSSMDDEQWKSQHINSTQGLQK----SPGSYSAGPNGEQPFSSTGTSQPSPAA----GTGG 732

  Fly   363 PPQLKTSEPKKEAEKSEPTVVKKPEP-------------VVSAKKPPPIKDYDLAELVKPNRMVK 414
            |.|:..|....:.:..|.:....|.|             .|:.|:..|..:        .:.:..
Zfish   733 PNQVGHSATASDTQAQEASHNHLPSPSSQSSATSGGQQGTVNTKESKPSGN--------GHSVGT 789

  Fly   415 SNLVSAAEALGNKM---QASKGGAPKKPQSPPM----TPKETLLRLPQDN-LNNSN 462
            .|..:.||.|.|.:   ||...||  ||:||.:    .|:.:.|.:.:.| .||||
Zfish   790 PNSTATAEGLPNHVHQGQADTAGA--KPRSPGVLSSDNPQLSALLIGKANDSNNSN 843

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spag1NP_651514.1 TPR_11 229..295 CDD:290150 14/91 (15%)
TPR repeat 229..257 CDD:276809 5/27 (19%)
TPR repeat 262..293 CDD:276809 8/54 (15%)
TPR_11 266..329 CDD:290150 17/113 (15%)
TPR 266..297 CDD:197478 9/54 (17%)
TPR repeat 298..326 CDD:276809 8/54 (15%)
kdm6aXP_005167851.1 TPR 74..332 CDD:223533 22/94 (23%)
TPR repeat 95..123 CDD:276809
TPR repeat 131..176 CDD:276809
TPR repeat 181..211 CDD:276809
TPR repeat 222..250 CDD:276809 4/7 (57%)
TPR repeat 260..295 CDD:276809 7/34 (21%)
TPR_17 289..320 CDD:290167 7/35 (20%)
TPR_11 302..365 CDD:290150 7/67 (10%)
TPR repeat 302..329 CDD:276809 5/31 (16%)
TPR repeat 334..364 CDD:276809 0/29 (0%)
TPR_1 335..368 CDD:278916 2/32 (6%)
TPR repeat 369..395 CDD:276809 5/25 (20%)
SSDP 572..852 CDD:282372 58/290 (20%)
JmjC 1149..1213 CDD:214721
JmjC 1183..1291 CDD:202224
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1124
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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