DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spag1 and ifit12

DIOPT Version :10

Sequence 1:NP_651514.1 Gene:Spag1 / 43239 FlyBaseID:FBgn0039463 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_001177394.1 Gene:ifit12 / 567504 ZFINID:ZDB-GENE-120406-2 Length:474 Species:Danio rerio


Alignment Length:410 Identity:84/410 - (20%)
Similarity:141/410 - (34%) Gaps:140/410 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 IHYLDFA----HVEKCTN---------------AREMEKIVQILRSGEEG--------HYPDLQR 54
            :.|.:||    |:|..|.               |.|...:.::|  ||:|        .|.|  :
Zfish    99 VTYGNFAWINYHMENYTECESYLVKLQKIHERFATESSAVPEVL--GEKGWTYLKFSRKYYD--K 159

  Fly    55 CAEEKLKALKPDS-----------KLFRYE--------------EQIKQSTDL--DKTELKPILD 92
            ..|...||::.|.           .|:|.|              :|::|:.||  |...|:.||.
Zfish   160 AVEVFQKAVELDPTNSEWNAGYAIALYRTENFNPPPCTVETPAIKQLRQAIDLNPDDDVLRVILG 224

  Fly    93 WTDAIKTKDNALNEL-----KKVKQNLNLPSV--------RKLSKIDLEKESKTEKPKPAPKATS 144
             ...:......:||.     |.:.|:...|.|        |....:|...|...:..:.:||:..
Zfish   225 -IKLLNCSKGLMNESEQLVEKALNQSPEHPHVIRYVGMFLRDQGSVDRSIEILKKALQRSPKSGF 288

  Fly   145 PSNT-----KNKEARIKSTDYRKWDKYDPDEEILRMDLNEERDQ-----EQREKIISNHSKSVTT 199
            ..:.     |.|:..:.....||            ::::|.|||     |:...:|.:...:|..
Zfish   289 ICHQLAMCYKTKKINLCKEKRRK------------VEVDEARDQSIYYLEEATSLIPSFISAVCQ 341

  Fly   200 DKLQ--SERDSLYERLQAQLKNLSQLEKEQFAERHRLRGNESFKA--------KEYEN-----AI 249
            ..||  ..||.|  :.:.|.....:|.||:         ||..::        ::|.|     ||
Zfish   342 LGLQYGDRRDLL--KAEEQFDKAFKLVKEK---------NEHLQSVHLSYAQFQQYSNRREDLAI 395

  Fly   250 EEYNCSIIYDPENAVHAYNNRAVAHLKLKKYFSAISDCQAC---LQIDPMNIKAHLRMAEAHNAE 311
            |.|...:..:|..   ...||:...|           |...   |:::|.:.||:..:...:|.:
Zfish   396 EHYEKCLTMNPHT---PDGNRSAQKL-----------CNIAKKNLKLNPNDWKANEILGLVYNLK 446

  Fly   312 GKHLESLNVYKKLLDFEPDN 331
            |:..|.   |....|.|.|:
Zfish   447 GEMFER---YGNTPDNEDDS 463

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spag1NP_651514.1 NlpI <229..373 CDD:443815 24/119 (20%)
TPR repeat 229..257 CDD:276809 8/40 (20%)
TPR repeat 262..293 CDD:276809 5/33 (15%)
TPR repeat 298..326 CDD:276809 6/27 (22%)
ifit12NP_001177394.1 TPR 55..>248 CDD:440225 32/153 (21%)
TPR repeat 55..83 CDD:276809
TPR repeat 88..127 CDD:276809 6/27 (22%)
TPR repeat 139..169 CDD:276809 9/33 (27%)
LapB 157..406 CDD:442196 55/274 (20%)
TPR repeat 174..212 CDD:276809 5/37 (14%)
TPR repeat 217..246 CDD:276809 6/29 (21%)
TPR repeat 286..331 CDD:276809 9/56 (16%)
TPR repeat 336..364 CDD:276809 7/29 (24%)
TPR repeat 374..402 CDD:276809 6/27 (22%)
Blue background indicates that the domain is not in the aligned region.

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