DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spag1 and spag1a

DIOPT Version :9

Sequence 1:NP_651514.1 Gene:Spag1 / 43239 FlyBaseID:FBgn0039463 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_001082875.2 Gene:spag1a / 564953 ZFINID:ZDB-GENE-030131-9443 Length:386 Species:Danio rerio


Alignment Length:209 Identity:60/209 - (28%)
Similarity:104/209 - (49%) Gaps:27/209 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   160 YRKWDKYDPDEEILRMDLN----------------EERDQEQREKIISNHSKSVTTDKLQSERDS 208
            |||  .|...:.:|::|::                |:...:.|||:....:..::..:.:.|..|
Zfish   176 YRK--AYVDYKTVLQIDISVQAAHDSVHRITKMLIEQDGPDWREKLPEIPAVPLSAQQHRKEEPS 238

  Fly   209 LYERLQAQLKNLSQLEKEQFAERH----RLRGNESFKAKEYENAIEEYN-CSIIYDPENAVHAYN 268
            . |.|||:.:...| ||.:.||..    :..|||..|..:::.|.|:|: |..|...|.|:  |.
Zfish   239 A-ELLQARAERAEQ-EKARKAEARFTILKQEGNELVKNSQFQGASEKYSECLAIKPNECAI--YT 299

  Fly   269 NRAVAHLKLKKYFSAISDCQACLQIDPMNIKAHLRMAEAHNAEGKHLESLNVYKKLLDFEPDNAI 333
            |||:..|||:::..|..||.:.||::|.|.||..|.|.||.....:|.:....:::|..:|:...
Zfish   300 NRALCFLKLERFAEAKQDCDSALQMEPKNKKAFYRRALAHKGLKDYLSASTDLQEVLQLDPNVQE 364

  Fly   334 AKKAVEKLTSMLGE 347
            |::.:|.:|::|.|
Zfish   365 AEQELEMVTNLLRE 378

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spag1NP_651514.1 TPR_11 229..295 CDD:290150 25/70 (36%)
TPR repeat 229..257 CDD:276809 10/32 (31%)
TPR repeat 262..293 CDD:276809 12/30 (40%)
TPR_11 266..329 CDD:290150 22/62 (35%)
TPR 266..297 CDD:197478 13/30 (43%)
TPR repeat 298..326 CDD:276809 7/27 (26%)
spag1aNP_001082875.2 TPR_11 87..157 CDD:290150
TPR repeat 87..112 CDD:276809
TPR repeat 125..155 CDD:276809
TPR_11 128..190 CDD:290150 5/15 (33%)
TPR repeat 160..188 CDD:276809 4/13 (31%)
TPR_11 263..326 CDD:290150 23/64 (36%)
TPR repeat 263..289 CDD:276809 8/25 (32%)
TPR repeat 294..324 CDD:276809 13/31 (42%)
TPR_11 297..360 CDD:290150 22/64 (34%)
TPR_1 297..328 CDD:278916 13/32 (41%)
TPR repeat 329..357 CDD:276809 7/27 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1124
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H8081
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D153676at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm26431
orthoMCL 1 0.900 - - OOG6_105718
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X6081
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
76.720

Return to query results.
Submit another query.