DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spag1 and spag1a

DIOPT Version :10

Sequence 1:NP_651514.1 Gene:Spag1 / 43239 FlyBaseID:FBgn0039463 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_001082875.2 Gene:spag1a / 564953 ZFINID:ZDB-GENE-030131-9443 Length:386 Species:Danio rerio


Alignment Length:209 Identity:60/209 - (28%)
Similarity:104/209 - (49%) Gaps:27/209 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   160 YRKWDKYDPDEEILRMDLN----------------EERDQEQREKIISNHSKSVTTDKLQSERDS 208
            |||  .|...:.:|::|::                |:...:.|||:....:..::..:.:.|..|
Zfish   176 YRK--AYVDYKTVLQIDISVQAAHDSVHRITKMLIEQDGPDWREKLPEIPAVPLSAQQHRKEEPS 238

  Fly   209 LYERLQAQLKNLSQLEKEQFAERH----RLRGNESFKAKEYENAIEEYN-CSIIYDPENAVHAYN 268
            . |.|||:.:...| ||.:.||..    :..|||..|..:::.|.|:|: |..|...|.|:  |.
Zfish   239 A-ELLQARAERAEQ-EKARKAEARFTILKQEGNELVKNSQFQGASEKYSECLAIKPNECAI--YT 299

  Fly   269 NRAVAHLKLKKYFSAISDCQACLQIDPMNIKAHLRMAEAHNAEGKHLESLNVYKKLLDFEPDNAI 333
            |||:..|||:::..|..||.:.||::|.|.||..|.|.||.....:|.:....:::|..:|:...
Zfish   300 NRALCFLKLERFAEAKQDCDSALQMEPKNKKAFYRRALAHKGLKDYLSASTDLQEVLQLDPNVQE 364

  Fly   334 AKKAVEKLTSMLGE 347
            |::.:|.:|::|.|
Zfish   365 AEQELEMVTNLLRE 378

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spag1NP_651514.1 NlpI <229..373 CDD:443815 41/124 (33%)
TPR repeat 229..257 CDD:276809 10/32 (31%)
TPR repeat 262..293 CDD:276809 12/30 (40%)
TPR repeat 298..326 CDD:276809 7/27 (26%)
spag1aNP_001082875.2 3a0801s09 <85..>361 CDD:273380 54/190 (28%)
TPR repeat 87..112 CDD:276809
TPR repeat 125..155 CDD:276809
TPR repeat 160..188 CDD:276809 4/13 (31%)
TPR repeat 263..289 CDD:276809 8/25 (32%)
TPR repeat 294..324 CDD:276809 13/31 (42%)
TPR repeat 329..357 CDD:276809 7/27 (26%)
Blue background indicates that the domain is not in the aligned region.

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