DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spag1 and tmtc1

DIOPT Version :10

Sequence 1:NP_651514.1 Gene:Spag1 / 43239 FlyBaseID:FBgn0039463 Length:469 Species:Drosophila melanogaster
Sequence 2:XP_001922025.3 Gene:tmtc1 / 555449 ZFINID:ZDB-GENE-070705-219 Length:872 Species:Danio rerio


Alignment Length:383 Identity:72/383 - (18%)
Similarity:125/383 - (32%) Gaps:123/383 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 EKEKKKSLLERYNIPIHYLDFAHVEKCTNAREMEKIVQILRS--GEEGHYPD--------LQRCA 56
            |:|.::.|.|......|:.|               ....|.|  .::||..:        ::.|.
Zfish   560 EEEAERMLKESIRFGPHFAD---------------AYSSLASLYADQGHSKEANEIYTKGIENCP 609

  Fly    57 EEK----------LKALKPDSKLFRYEEQIKQSTDLDKTELKP-----ILDWTDAIK-TKDNALN 105
            |..          :...:.|...|.|:|.::         |||     :::....:: :.||...
Zfish   610 ESSDLHNNYGVFLVDTGRGDRAAFHYQEAVR---------LKPAHYVAMVNLGRLLRSSNDNKEA 665

  Fly   106 EL--KKVKQNLNLPSVRKLSKIDLEKESKTEKPKPAPKATSPSNTKNKEARIKSTDYRKWDKYDP 168
            ||  |:.     |..|||:..:             .|......||...|..::.  ||:.....|
Zfish   666 ELWYKRA-----LQVVRKVDIL-------------TPLGALYYNTGRYEEALEV--YREASTLQP 710

  Fly   169 DE--------EILRMDLNEERDQEQREKIISNHSKSVTTDKL----QSERDSLYERLQAQLKNLS 221
            |.        ::|.|.......::....|||..|..:...:|    .|::.:..|.|.| ||...
Zfish   711 DSTDIWLALAQVLAMAGRSTEAEKMTLGIISKTSNCIECYRLLSAIYSKQGNHTEALDA-LKTAL 774

  Fly   222 QLEKEQ---FAERHRLRGNESFKAKEYENAIEEYNCSIIYDPENAVHAYNNRAVAHLKLKKYFSA 283
            |.|..:   .||.|...||:..:..|.:.|.:.|..::...||.:....|...:.|:|       
Zfish   775 QQESSEPAVRAELHFSMGNQLREMNELDRAFQSYKLAVELKPEQSQAWMNMGGIQHIK------- 832

  Fly   284 ISDCQACLQIDPMNIKAHLRMAEAHNAEGKHLESLNVYKKLLDFEPDNAIAKKAVEKL 341
                                        |.:..:...|::.|...||:.:.|:.:.||
Zfish   833 ----------------------------GDYAAARMYYQRALLLSPDSKLLKENLAKL 862

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spag1NP_651514.1 NlpI <229..373 CDD:443815 21/113 (19%)
TPR repeat 229..257 CDD:276809 8/27 (30%)
TPR repeat 262..293 CDD:276809 3/30 (10%)
TPR repeat 298..326 CDD:276809 2/27 (7%)
tmtc1XP_001922025.3 TMTC_DUF1736 287..361 CDD:462468
TPR repeat 479..507 CDD:276809
LapB 483..735 CDD:442196 38/218 (17%)
TPR repeat 512..539 CDD:276809
TPR repeat 544..572 CDD:276809 4/11 (36%)
TPR repeat 578..606 CDD:276809 5/42 (12%)
TPR repeat 611..641 CDD:276809 4/38 (11%)
TPR repeat 646..674 CDD:276809 5/32 (16%)
LapB 652..872 CDD:442196 53/267 (20%)
TPR repeat 712..742 CDD:276809 4/29 (14%)
TPR repeat 747..775 CDD:276809 7/28 (25%)
TPR repeat 784..814 CDD:276809 8/29 (28%)
TPR repeat 819..846 CDD:276809 5/61 (8%)
Blue background indicates that the domain is not in the aligned region.

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