DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spag1 and stip1

DIOPT Version :10

Sequence 1:NP_651514.1 Gene:Spag1 / 43239 FlyBaseID:FBgn0039463 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_001007767.1 Gene:stip1 / 493606 ZFINID:ZDB-GENE-041121-17 Length:542 Species:Danio rerio


Alignment Length:553 Identity:110/553 - (19%)
Similarity:192/553 - (34%) Gaps:215/553 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 MEKIVQILRSGEE----GHYPDLQRCAEEKLKALKPDSKLFR-----------YEEQIKQSTDLD 83
            |||:.|:...|.:    |:..:..||..|.|.....:..||.           |:..:|.:....
Zfish     1 MEKVSQLKDQGNKALSAGNLEEAIRCYTEALTLDPSNHVLFSNRSAAYAKKGDYDNALKDACQTI 65

  Fly    84 KTELKPILDWTDAIKTKDNAL-----------------------NELKKVKQNL----------- 114
            |  :||  ||......|..||                       .:||:..||:           
Zfish    66 K--IKP--DWGKGYSRKAAALEFLGRLEDAKATYQEGLRQEPSNQQLKEGLQNMEARLAEKKMMN 126

  Fly   115 -----NL----------------PSVRKLSK---------------------------IDL---- 127
                 ||                ||.|:|.:                           :||    
Zfish   127 PFSIPNLYEKLEGDSRTRALLSDPSYRELLEQLRNKPSELGTKLQDPRVMTTLSVLLGLDLSGMD 191

  Fly   128 EKESKTEKPKPAPKATSPSNTKN-----------KEARIKSTDYRKWD------------KYDP- 168
            |:|..|..|.|.||.|:|...|.           ||..:.:..|:|.|            |:|| 
Zfish   192 EEEEPTPPPPPKPKETAPPPPKEEDLPENKRMALKEKELGNAAYKKKDFATALKHYEEAIKHDPT 256

  Fly   169 ----------------DEEILR------MDLNEER-------------------DQEQREKIISN 192
                            |.:..|      :|:..|.                   .||:.::.:..
Zfish   257 NMTYLSNQAAVYFEKGDFDKCRELCEKAIDVGRENREDYRQIAKAYARIGNSYFKQEKYKEAVQF 321

  Fly   193 HSKSVTTDKLQSERDSLYERLQAQLKNLSQLEKEQF-----AERHRLRGNESFKAKEYENAIEEY 252
            .:||:|    :.....:.::.|...|.|.:.||..:     |...:.:||::|:..:|..|::.|
Zfish   322 FNKSLT----EHRTPDVLKKCQEAEKILKEQEKVAYINPDLALEEKNKGNDAFQKGDYPLAMKHY 382

  Fly   253 NCSIIYDPENAVHAYNNRAVAHLKLKKYFSAISDCQACLQIDPMNIKAHLRMAEAHNAEGKHLES 317
            :.:|..:|.:| ..::|||..:.||.::..|:.||:.|:.:|...||.:.|...|..|.....::
Zfish   383 SEAIKRNPYDA-KLFSNRAACYTKLLEFQLALKDCEECINLDSTFIKGYTRKGAALEAMKDFSKA 446

  Fly   318 LNVYKKLLDFEPDNAIAKKAVEKLTSML-----------------------GEVAPSSATRLIIE 359
            ::||:|.|:.:.:   :|:|.|.|...:                       .::....|.|:|:|
Zfish   447 MDVYQKALELDSN---SKEATEGLQRCMVSQAMRNDSPEDVKRRAMADPEVQQIMSDPAMRMILE 508

  Fly   360 EI--DPPQLKTSEPKKEAEKSEPTVVKKPEPVV 390
            ::  ||..|  |:..|     .|.:.:|.:.::
Zfish   509 QMQKDPQAL--SDHLK-----NPVIAQKIQKLI 534

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spag1NP_651514.1 NlpI <229..373 CDD:443815 41/168 (24%)
TPR repeat 229..257 CDD:276809 7/27 (26%)
TPR repeat 262..293 CDD:276809 10/30 (33%)
TPR repeat 298..326 CDD:276809 8/27 (30%)
stip1NP_001007767.1 Spy 1..>105 CDD:443119 22/107 (21%)
TPR repeat 7..32 CDD:276809 5/24 (21%)
TPR repeat 37..67 CDD:276809 5/31 (16%)
TPR repeat 72..100 CDD:276809 3/27 (11%)
STI1 131..184 CDD:436075 6/52 (12%)
TPR repeat 228..252 CDD:276809 3/23 (13%)
TPR 230..469 CDD:440225 53/246 (22%)
TPR repeat 257..287 CDD:276809 2/29 (7%)
TPR repeat 299..326 CDD:276809 3/26 (12%)
TPR repeat 363..387 CDD:276809 6/23 (26%)
TPR repeat 392..422 CDD:276809 10/30 (33%)
TPR repeat 427..455 CDD:276809 8/27 (30%)
STI1 481..535 CDD:436075 11/61 (18%)

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