DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spag1 and Ttc1

DIOPT Version :10

Sequence 1:NP_651514.1 Gene:Spag1 / 43239 FlyBaseID:FBgn0039463 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_650543.1 Gene:Ttc1 / 41993 FlyBaseID:FBgn0038428 Length:263 Species:Drosophila melanogaster


Alignment Length:202 Identity:56/202 - (27%)
Similarity:96/202 - (47%) Gaps:26/202 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   170 EEILRMDLNEERDQEQR-EKIISNHSKSVTTDKLQS--------------ERDSLYERLQAQLKN 219
            |||...:....|..|:. ::|:...::....|:.:.              :.:...|.|:.:.|:
  Fly    17 EEITEKEATSTRQSEKDVDEIVEKQNQLALDDEAEQGAAGGDSIATPTTVDSELTIEELREREKD 81

  Fly   220 LS--QL--EKEQFAERHRLRGNESFKAKEYENAIEEYN-----CSIIYDPENAVHAYNNRAVAHL 275
            ||  ||  .||: |::.::.|||.||..:.|.|.:.|.     |......|.|| .|.|||.|.:
  Fly    82 LSPEQLTANKEK-ADKLKVEGNELFKNDDAEGAAKTYTEALDICPSASSKERAV-LYGNRAAAKI 144

  Fly   276 KLKKYFSAISDCQACLQIDPMNIKAHLRMAEAHNAEGKHLESLNVYKKLLDFEPDNAIAKKAVEK 340
            ||:...:||.||...:::.|..::..||.|:.:..|.|..|:|..|||:.:.:|....|::|..:
  Fly   145 KLEANKAAIDDCTKAIELWPEYVRVLLRRAKLYEQEDKPDEALEDYKKVTEIDPGQQEAREAQIR 209

  Fly   341 LTSMLGE 347
            |..::.|
  Fly   210 LPPIINE 216

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spag1NP_651514.1 NlpI <229..373 CDD:443815 40/124 (32%)
TPR repeat 229..257 CDD:276809 10/32 (31%)
TPR repeat 262..293 CDD:276809 13/30 (43%)
TPR repeat 298..326 CDD:276809 10/27 (37%)
Ttc1NP_650543.1 3a0801s09 16..>232 CDD:273380 56/202 (28%)
TPR repeat 94..122 CDD:276809 9/27 (33%)
TPR repeat 132..162 CDD:276809 13/30 (43%)
TPR repeat 167..195 CDD:276809 10/27 (37%)

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