DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spag1 and Tmtc4

DIOPT Version :10

Sequence 1:NP_651514.1 Gene:Spag1 / 43239 FlyBaseID:FBgn0039463 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_650451.1 Gene:Tmtc4 / 41867 FlyBaseID:FBgn0038324 Length:705 Species:Drosophila melanogaster


Alignment Length:247 Identity:52/247 - (21%)
Similarity:91/247 - (36%) Gaps:84/247 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   154 RIKSTDYRKWDKYDPDEEILRMDLNEERDQEQREKIISNHSK------SVTTDKLQSERD----- 207
            |.::||:                ||||:..:...::..:::|      .:.||...:.:.     
  Fly   420 RQRATDW----------------LNEEQLFKSALQVCPDNAKVHYNIARLATDMGNNTKAFQHYH 468

  Fly   208 ---SLYERLQAQLKNLSQLEKE----QFAE---RHRLRGNESFKAK------------EYENAIE 250
               .||...::.|.||..|.:|    ..||   |..|:...:|.|.            :|:.|:.
  Fly   469 RAIELYPNYESALMNLGNLYREHGQLSTAEEYIRLALQAYPAFPAAWMNLGIVQSAQGKYDKALA 533

  Fly   251 EYNCSIIYDPENAVHAYNNRAVAHLKLKKYFSAISDCQACLQIDPMNIKA--------------- 300
            .|..::.|....|| .|.|....:|:.|:|..|:...|..:.::|...||               
  Fly   534 SYEKALKYRANFAV-CYYNMGNLYLEQKRYAEALHHWQHAVALNPRQPKAWANILTMLDNKGLQD 597

  Fly   301 -HLRM---AEAH------------NAEGK---HLESLNVYKKLLDFEPDNAI 333
             .||:   |..|            |..||   :.|:..:||::::.||.|.:
  Fly   598 DALRISNQALQHLPNDVSILFIRANVLGKLKHYTEAEAIYKRVIELEPHNTL 649

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spag1NP_651514.1 NlpI <229..373 CDD:443815 35/154 (23%)
TPR repeat 229..257 CDD:276809 9/42 (21%)
TPR repeat 262..293 CDD:276809 9/30 (30%)
TPR repeat 298..326 CDD:276809 12/61 (20%)
Tmtc4NP_650451.1 TMTC_DUF1736 258..331 CDD:462468
LapB 431..675 CDD:442196 45/220 (20%)
TPR repeat 444..472 CDD:276809 3/27 (11%)
TPR repeat 480..506 CDD:276809 8/25 (32%)
TPR repeat 511..541 CDD:276809 5/29 (17%)
TPR repeat 546..574 CDD:276809 9/28 (32%)
TPR repeat 580..608 CDD:276809 5/27 (19%)
TPR repeat 614..642 CDD:276809 6/27 (22%)
TPR repeat 647..677 CDD:276809 1/3 (33%)
Blue background indicates that the domain is not in the aligned region.

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