DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spag1 and odad4

DIOPT Version :9

Sequence 1:NP_651514.1 Gene:Spag1 / 43239 FlyBaseID:FBgn0039463 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_956610.1 Gene:odad4 / 393286 ZFINID:ZDB-GENE-040426-995 Length:486 Species:Danio rerio


Alignment Length:279 Identity:55/279 - (19%)
Similarity:108/279 - (38%) Gaps:53/279 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   236 GNESFKAKEYENAIEEYNCSIIYDPENAVHAYNNRAVAHLKLKKYFSAISDCQACLQIDPMNIKA 300
            |::.|:..||..|:|.:..::...|:|. :...:|:..::||....:|:.|.::.|:.:....|.
Zfish    21 GDQLFQRGEYVKAVESFTTALTLQPDNK-NCLVSRSRCYVKLGDAENALKDAESSLKDNKNYFKG 84

  Fly   301 HLRMAEAHNAEGKHLESLNVYKKLLDFEPD----NAIAKKAVEKLTSMLGEVAPSSATRLIIE-- 359
            ..:.|||....|....:|..|.:.....|:    ....:||.|.:.:.:|  :||| .:|:.:  
Zfish    85 LYQKAEALYTMGDFEFALVYYHRGHKLRPELQEFRLGIQKAQEAIDNSVG--SPSS-VKLVNKGD 146

  Fly   360 ------EIDPPQLKTSEPK------KEAEKSEPTVVKKPEPVVSAKK--PPPIKDYDLAEL-VKP 409
                  .:.|..|..|..|      |:.:|.|.|..:....:.|.::  ...::|.||.:. ::.
Zfish   147 LSFFHNGVHPQNLNPSNKKESKKHSKKTDKGEKTAKQLLGELYSDREYLKKLLQDEDLVKCKIRS 211

  Fly   410 NRMVKSNLVSAAEALGNKMQASKGGAP----------------KKPQSPPMTPKETLLR------ 452
            ...|:..:|.:...|..:|...:...|                |....||..|...:|.      
Zfish   212 GERVQDLIVGSISYLDTRMAFWQQQKPIYARQRDRKLMQQQWSKVLHKPPSDPTRYVLSSLEEID 276

  Fly   453 ------LPQDNLNNSNKLL 465
                  ..:..||.:.:|:
Zfish   277 TALSAGYTESGLNKARELM 295

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spag1NP_651514.1 TPR_11 229..295 CDD:290150 14/58 (24%)
TPR repeat 229..257 CDD:276809 6/20 (30%)
TPR repeat 262..293 CDD:276809 7/30 (23%)
TPR_11 266..329 CDD:290150 13/62 (21%)
TPR 266..297 CDD:197478 6/30 (20%)
TPR repeat 298..326 CDD:276809 7/27 (26%)
odad4NP_956610.1 TPR 1. /evidence=ECO:0000255 14..47 7/25 (28%)
TPR_11 16..79 CDD:290150 14/58 (24%)
TPR repeat 16..42 CDD:276809 6/20 (30%)
TPR repeat 47..77 CDD:276809 7/30 (23%)
TPR 2. /evidence=ECO:0000255 49..81 6/31 (19%)
TPR_11 50..113 CDD:290150 13/62 (21%)
TPR 3. /evidence=ECO:0000255 82..115 8/32 (25%)
TPR repeat 82..110 CDD:276809 7/27 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 153..180 7/26 (27%)
TPR_12 313..379 CDD:290160
TPR 4. /evidence=ECO:0000255 314..347
TPR repeat 316..342 CDD:276809
TPR repeat 347..383 CDD:276809
TPR 5. /evidence=ECO:0000255 354..387
TPR_12 355..423 CDD:290160
TPR 6. /evidence=ECO:0000255 391..424
TPR 7. /evidence=ECO:0000255 431..464
TPR repeat 431..459 CDD:276809
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1124
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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