DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spag1 and Tmtc1

DIOPT Version :10

Sequence 1:NP_651514.1 Gene:Spag1 / 43239 FlyBaseID:FBgn0039463 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_945318.2 Gene:Tmtc1 / 387314 MGIID:3039590 Length:942 Species:Mus musculus


Alignment Length:381 Identity:77/381 - (20%)
Similarity:141/381 - (37%) Gaps:105/381 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 REMEKIVQILRSGEEGHYPDLQRCAEEKLKALK------PD--------SKLFRYEEQIKQSTDL 82
            |.:..:..:|:|.|:         .||.:..||      ||        :.|...:|:.|::.|:
Mouse   609 RALFNLGNLLKSQEK---------TEEAIMLLKESIKYGPDFADAYSSLASLLAEQERFKEAEDI 664

  Fly    83 DKTELKPILDWTD-----AIKTKDNALNE--LKKVKQNLNL-PS----VRKLSKI--DLEKESKT 133
            .:..:|...|.:|     |:...|:...|  :...:|.:.| ||    |..|.::  .|.:.||.
Mouse   665 YQAGIKNCPDSSDLHNNYAVFLVDSGFPEKAVAHYQQAIQLSPSHHVAVVNLGRLYRSLGENSKA 729

  Fly   134 E-------KPKPAPKATSP-----SNT-KNKEARIKSTDYRKWDKYDPDEEILRMDLNE---ERD 182
            |       |.....:..||     .|| ::|||   ...||:.....|.:..||:.|.:   ...
Mouse   730 EEWYRRALKVARTAEVLSPLGALYYNTGRHKEA---LEVYREAVSLQPSQRELRLALAQVLAVMG 791

  Fly   183 QEQREKIISNHSKSVTTDKLQSER--DSLYERLQAQLKNLSQLEK---------EQFAERHRLRG 236
            |.:..:.|::|..|.....|:..|  .:::.:.:...|.|..:||         :..:|....:|
Mouse   792 QTKEAEKITSHIVSEEPRCLECYRLLSAIHSKQEHHGKALEAIEKALQLKPKDPKVISELFFTKG 856

  Fly   237 NESFKAKEYENAIEEYNCSIIYDPENAVHAYNNRAVAHLKLKKYFSAISDCQACLQIDPMNIKAH 301
            |:..:....:.|.|.|..::..||:.|                                   :|.
Mouse   857 NQLREQNLLDKAFESYEAAVTLDPDQA-----------------------------------QAW 886

  Fly   302 LRMAEAHNAEGKHLESLNVYKKLLDFEPDNAIAKKAVEKLTSM---LGEVAPSSAT 354
            :.|....:.:|.::.:...|::.|...||:.:.|:.:.||..:   |.||.....|
Mouse   887 MNMGGIRHIQGSYVSARAYYERALKLVPDSKLLKENLAKLDRLERRLQEVRERDQT 942

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spag1NP_651514.1 NlpI <229..373 CDD:443815 23/129 (18%)
TPR repeat 229..257 CDD:276809 6/27 (22%)
TPR repeat 262..293 CDD:276809 1/30 (3%)
TPR repeat 298..326 CDD:276809 4/27 (15%)
Tmtc1NP_945318.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 245..285
TMTC_DUF1736 351..425 CDD:462468
TPR 1. /evidence=ECO:0000255|PROSITE-ProRule:PRU00339 543..576
TPR repeat 543..571 CDD:276809
LapB 547..798 CDD:442196 45/200 (23%)
TPR repeat 576..603 CDD:276809
TPR 2. /evidence=ECO:0000255|PROSITE-ProRule:PRU00339 577..607
TPR 3. /evidence=ECO:0000255|PROSITE-ProRule:PRU00339 608..641 9/40 (23%)
TPR repeat 608..636 CDD:276809 8/35 (23%)
TPR 4. /evidence=ECO:0000255|PROSITE-ProRule:PRU00339 642..675 5/32 (16%)
TPR repeat 642..670 CDD:276809 4/27 (15%)
TPR repeat 675..705 CDD:276809 5/29 (17%)
TPR 5. /evidence=ECO:0000255|PROSITE-ProRule:PRU00339 676..709 7/32 (22%)
LapB 683..938 CDD:442196 59/292 (20%)
TPR 6. /evidence=ECO:0000255|PROSITE-ProRule:PRU00339 710..742 7/31 (23%)
TPR repeat 710..738 CDD:276809 6/27 (22%)
TPR 7. /evidence=ECO:0000255|PROSITE-ProRule:PRU00339 743..776 10/35 (29%)
TPR repeat 743..771 CDD:276809 9/30 (30%)
TPR repeat 776..806 CDD:276809 6/29 (21%)
TPR 8. /evidence=ECO:0000255 777..810 7/32 (22%)
TPR 9. /evidence=ECO:0000255|PROSITE-ProRule:PRU00339 811..844 6/32 (19%)
TPR repeat 812..839 CDD:276809 5/26 (19%)
TPR repeat 844..878 CDD:276809 6/33 (18%)
TPR 10. /evidence=ECO:0000255|PROSITE-ProRule:PRU00339 849..882 8/32 (25%)
TPR 11. /evidence=ECO:0000255|PROSITE-ProRule:PRU00339 883..916 7/67 (10%)
TPR repeat 883..911 CDD:276809 5/62 (8%)
Blue background indicates that the domain is not in the aligned region.

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