DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spag1 and Sgt

DIOPT Version :9

Sequence 1:NP_651514.1 Gene:Spag1 / 43239 FlyBaseID:FBgn0039463 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_001246058.1 Gene:Sgt / 35052 FlyBaseID:FBgn0032640 Length:331 Species:Drosophila melanogaster


Alignment Length:345 Identity:76/345 - (22%)
Similarity:130/345 - (37%) Gaps:74/345 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   144 SPSNTKNKEARIKSTDYRKWDKYDPDEEILRMDLNEERDQEQREKIISNHSKSVTTDKLQSERDS 208
            ||..|::.|..|:... ..:|..| |.|.......||:...|.    |:.:.:...|.:.|....
  Fly    25 SPDQTESIEVAIQCLQ-AAFDLGD-DVEAAPAAAGEEQATTQS----SSTASAPDDDAVASGSAG 83

  Fly   209 LYERLQAQLKNLSQLEKEQ------------FAERHRLRGNESFKAKEYENAIEEYNCSIIYDPE 261
            :.....|...|:...|..|            .||..:..||...|..:|..|:.:||.:|.:||:
  Fly    84 IGAAAAAVPNNIDMFELFQSLYTERNPESLALAESIKNEGNRLMKENKYNEALLQYNRAIAFDPK 148

  Fly   262 NAVHAYNNRAVAHLKLKKYFSAISDCQACLQIDPMNIKAHLRMAEAHNAEGKHLESLNVYKKLLD 326
            |.:. |.|||.||::|.:...|::||::.|..:....||:.|:..|::..|...::...|.|.::
  Fly   149 NPIF-YCNRAAAHIRLGENERAVTDCKSALVYNNNYSKAYCRLGVAYSNMGNFEKAEQAYAKAIE 212

  Fly   327 FEPDNAIAKKAVEKLTSMLGEVAPSSATRLIIEEIDPPQLKTSEPKKEAEKSEPTVVKKPEPVVS 391
            .||||.:.|..:                               |..:.|....|...:..|.:::
  Fly   213 LEPDNEVYKSNL-------------------------------EAARNARNQPPQTGRLREDLIN 246

  Fly   392 AKKPPPIK------DYDLAELVK--PNRMVKSNLVSAAEALGNKMQASKGGAPKKPQSP-----P 443
            ....|.::      :.|:.:|:.  .|.|:.:.:         :.|...|.||..|...     .
  Fly   247 MLSQPMVRNLFNNAEIDVEQLLSMLQNPMIMNTI---------RQQFGGGNAPTLPNDMVQMIYN 302

  Fly   444 MTPKETLLRLPQDNLNNSNK 463
            ||.:  |...|..|.|..|:
  Fly   303 MTSQ--LTGFPNSNANPGNE 320

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spag1NP_651514.1 TPR_11 229..295 CDD:290150 24/65 (37%)
TPR repeat 229..257 CDD:276809 9/27 (33%)
TPR repeat 262..293 CDD:276809 12/30 (40%)
TPR_11 266..329 CDD:290150 18/62 (29%)
TPR 266..297 CDD:197478 11/30 (37%)
TPR repeat 298..326 CDD:276809 7/27 (26%)
SgtNP_001246058.1 SGTA_dimer 9..>48 CDD:293154 7/24 (29%)
TPR_11 116..177 CDD:290150 23/61 (38%)
TPR_2 116..149 CDD:285020 12/32 (38%)
TPR repeat 116..144 CDD:276809 9/27 (33%)
TPR_17 139..170 CDD:290167 13/31 (42%)
TPR repeat 149..179 CDD:276809 12/30 (40%)
TPR_16 156..218 CDD:290168 19/61 (31%)
TPR_1 184..217 CDD:278916 9/32 (28%)
TPR repeat 184..212 CDD:276809 7/27 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45462413
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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