DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spag1 and sgta

DIOPT Version :10

Sequence 1:NP_651514.1 Gene:Spag1 / 43239 FlyBaseID:FBgn0039463 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_997929.1 Gene:sgta / 336867 ZFINID:ZDB-GENE-030131-8811 Length:320 Species:Danio rerio


Alignment Length:131 Identity:47/131 - (35%)
Similarity:75/131 - (57%) Gaps:3/131 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly   225 KEQFAERHRLR--GNESFKAKEYENAIEEYNCSIIYDPENAVHAYNNRAVAHLKLKKYFSAISDC 287
            :.|.||..||:  ||:..|.:.:..|:|.|:.:|..:|:|||: :.|||.|:.||..|..|:.||
Zfish    85 EHQLAEAERLKTDGNDQMKVENFSAAVEFYSKAIQLNPQNAVY-FCNRAAAYSKLGNYAGAVQDC 148

  Fly   288 QACLQIDPMNIKAHLRMAEAHNAEGKHLESLNVYKKLLDFEPDNAIAKKAVEKLTSMLGEVAPSS 352
            :..:.||....||:.||..|..:..|:.|:::.|||.|:.:|||...|..::.....:.|..||:
Zfish   149 ERAIGIDANYSKAYGRMGLALASLNKYSEAVSYYKKALELDPDNDTYKVNLQVAEQKVKETQPST 213

  Fly   353 A 353
            |
Zfish   214 A 214

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spag1NP_651514.1 NlpI <229..373 CDD:443815 46/127 (36%)
TPR repeat 229..257 CDD:276809 10/29 (34%)
TPR repeat 262..293 CDD:276809 13/30 (43%)
TPR repeat 298..326 CDD:276809 10/27 (37%)
sgtaNP_997929.1 SGTA_dimer 5..63 CDD:465168
TPR repeat 91..119 CDD:276809 8/27 (30%)
TPR 98..>210 CDD:440225 39/112 (35%)
TPR repeat 124..154 CDD:276809 13/30 (43%)
TPR repeat 159..187 CDD:276809 10/27 (37%)
Blue background indicates that the domain is not in the aligned region.

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