DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spag1 and Stip1

DIOPT Version :10

Sequence 1:NP_651514.1 Gene:Spag1 / 43239 FlyBaseID:FBgn0039463 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_477354.1 Gene:Stip1 / 33202 FlyBaseID:FBgn0024352 Length:490 Species:Drosophila melanogaster


Alignment Length:517 Identity:103/517 - (19%)
Similarity:184/517 - (35%) Gaps:197/517 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 MEKIVQILRSGEEGHYPDLQRCAEEKLKALKPDSKLFRYEEQI---------------------- 76
            |:|:.::...|.:.            |.|.|.|..:..|.|.|                      
  Fly     1 MDKVNELKEKGNQA------------LSAEKFDEAVAAYTEAIALDDQNHVLYSNRSAAFAKAGK 53

  Fly    77 --KQSTDLDKT-ELKPILDWTDAIKTKDNA---LNELKKVKQNLN-------------------- 115
              :...|.:|| :|.|  .|......|..|   ||:..|..:..|                    
  Fly    54 FQEALEDAEKTIQLNP--TWPKGYSRKGAAAAGLNDFMKAFEAYNEGLKYDPTNAILLQGRMETT 116

  Fly   116 ---LPSVRKLSKIDLE------KESKTEKPKPA-----PKATSP------SNTKN-----KEARI 155
               |..::....|.::      :..:...|.||     ||...|      ...||     ||..:
  Fly   117 ASALSFMQSQGDIPMDVDPQQARSRRAPSPPPAKPAEPPKPAEPRVEDMTEEQKNKYFARKEKEL 181

  Fly   156 KSTDYRKWD------------KYDP-------------------DEEILRMDLNEERDQEQRE-- 187
            .:..|:|.|            ::||                   :|.|.:.:...|..:|.|.  
  Fly   182 GNAAYKKKDFETALKHYHAAIEHDPTDITFYNNIAAVHFERKEYEECIKQCEKGIEVGRESRADF 246

  Fly   188 KIISNHSKSV--TTDKLQSERDS--LYERLQAQLK------NLSQLE---KE---------QFAE 230
            |:|:.....:  |..||::.:.:  .||:..::.:      :||::|   ||         :.||
  Fly   247 KLIAKSFARIGNTYRKLENYKQAKVYYEKAMSEHRTPEIKTSLSEVEAKIKEEERMAYINPEKAE 311

  Fly   231 RHRLRGNESFKAKEYENAIEEYNCSIIYDPENAVHAYNNRAVAHLKLKKYFSAISDCQACLQIDP 295
            ..:.:||..||..:|..|::.|..:|..:|::. ..|:|||..:.||..:...:.||..|:::|.
  Fly   312 EEKEQGNLFFKKGDYSTAVKHYTEAIKRNPDDP-KLYSNRAACYTKLAAFDLGLKDCDTCIKLDE 375

  Fly   296 MNIKAHLRMAEAHNAEGKHLESLN-------VYKKLLDFEPDNAIAKKAVE--KLTSM------- 344
            ..||.::|       :||.|:.:.       .|:|.|:.:|:||   :|:|  :..||       
  Fly   376 KFIKGYIR-------KGKILQGMQQQSKAQAAYQKALELDPNNA---EAIEGYRQCSMNFQRNPQ 430

  Fly   345 -----------LGEVAPSSATRLIIEEIDPPQLKTSEPKKEAEKSEPTVVKK--PEPVVSAK 393
                       :.::....|.|:|:|::               :|:|..||:  ..|.::.|
  Fly   431 EVLKNAMSDPEIQQILKDPAMRMILEQM---------------QSDPNAVKEHLQNPAIADK 477

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spag1NP_651514.1 NlpI <229..373 CDD:443815 41/170 (24%)
TPR repeat 229..257 CDD:276809 9/27 (33%)
TPR repeat 262..293 CDD:276809 9/30 (30%)
TPR repeat 298..326 CDD:276809 8/34 (24%)
Stip1NP_477354.1 TPR repeat 7..32 CDD:276809 7/36 (19%)
TPR 10..276 CDD:440225 49/279 (18%)
TPR repeat 37..67 CDD:276809 3/29 (10%)
TPR repeat 72..100 CDD:276809 6/27 (22%)
LapB 173..415 CDD:442196 57/252 (23%)
TPR repeat 175..203 CDD:276809 5/27 (19%)
TPR repeat 208..238 CDD:276809 2/29 (7%)
TPR repeat 250..278 CDD:276809 5/27 (19%)
TPR repeat 310..338 CDD:276809 9/27 (33%)
TPR repeat 343..373 CDD:276809 9/30 (30%)
TPR repeat 378..406 CDD:276809 8/34 (24%)
STI1 429..482 CDD:436075 10/64 (16%)

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