DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spag1 and tomm34

DIOPT Version :10

Sequence 1:NP_651514.1 Gene:Spag1 / 43239 FlyBaseID:FBgn0039463 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_955932.2 Gene:tomm34 / 323361 ZFINID:ZDB-GENE-030131-2081 Length:305 Species:Danio rerio


Alignment Length:288 Identity:75/288 - (26%)
Similarity:118/288 - (40%) Gaps:74/288 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 KALKPDSKLFRYEEQIKQSTDLDKTELKPILDWTDAIKTKDNALNELKKVKQNLNLPSVRKLSKI 125
            |||...:..|...|:.:|:....||.|:  :||.  |....:.:|.:.|....::.||.|     
Zfish    87 KALLRRAAAFEALERYRQAYVDYKTVLQ--IDWN--IPAAHDGVNRMTKALTEMDGPSWR----- 142

  Fly   126 DLEKESKTEKPKPAPKATSPSNTKNKEARIKSTDYRKWDKYDPDEEILRMDLNEERDQEQREKII 190
                    ||..|.|  |.|.:.|.|..:..|                      .....|:..:|
Zfish   143 --------EKLPPIP--TVPMSVKEKLGQAAS----------------------PASSSQQNNVI 175

  Fly   191 SNHSKSVTTDKLQSERDSLYERLQAQLKNLSQLEKEQFAERHRLRGNESFKAKEYENAIEEYNCS 255
            .:..|:...|.::..|               .|::|         ||...|..|::.|:|:|..|
Zfish   176 DDKKKAPGPDAVKKGR---------------TLKEE---------GNALVKKGEHKKAMEKYTQS 216

  Fly   256 IIYDPENAVHAYNNRAVAHLKLKKYFSAISDCQACLQIDPMNIKAHLRMAEAHNAEGKH----LE 316
            :..|| ..|..|.|||:.:|.||.|..||.||:..|::|..||||..|.|:|:. |.|:    :|
Zfish   217 LAQDP-TEVTTYTNRALCYLALKMYKDAIRDCEEALRLDSANIKALYRRAQAYK-ELKNKKSCIE 279

  Fly   317 SLNVYKKLLDFEPDNAIAKKAVEKLTSM 344
            .||   .:|..:|:|...:|.::::..|
Zfish   280 DLN---SVLKIDPNNTAVQKLLQEVQKM 304

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spag1NP_651514.1 NlpI <229..373 CDD:443815 42/120 (35%)
TPR repeat 229..257 CDD:276809 8/27 (30%)
TPR repeat 262..293 CDD:276809 14/30 (47%)
TPR repeat 298..326 CDD:276809 11/31 (35%)
tomm34NP_955932.2 3a0801s09 <13..>291 CDD:273380 72/273 (26%)
TPR repeat 13..38 CDD:276809
TPR repeat 43..81 CDD:276809
TPR repeat 86..114 CDD:276809 8/26 (31%)
TPR repeat 191..218 CDD:276809 11/50 (22%)
TPR repeat 223..253 CDD:276809 14/29 (48%)
TPR repeat 258..286 CDD:276809 11/31 (35%)
Blue background indicates that the domain is not in the aligned region.

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