DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spag1 and Spag1

DIOPT Version :9

Sequence 1:NP_651514.1 Gene:Spag1 / 43239 FlyBaseID:FBgn0039463 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_001346910.1 Gene:Spag1 / 26942 MGIID:1349387 Length:913 Species:Mus musculus


Alignment Length:367 Identity:111/367 - (30%)
Similarity:188/367 - (51%) Gaps:54/367 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 YNIPIHYLDFAHVEKCTNAREMEKIVQILRSGEEGHYPDLQRCAEEKLKALKPDSKLFRYEEQIK 77
            :.|||.:|||.::|.|::.:.:|||:.:|||||||:||:|....|:.|..|.|.|:..|.::..:
Mouse    32 FKIPIEHLDFKYIENCSDVKHLEKILYVLRSGEEGYYPELTEFCEKCLTNLAPKSRALRKDKPAE 96

  Fly    78 QSTDLDKTELKPI----LDWTDAIKTKDNALNELKKVKQNLNLPSVRKLSKIDLEKESKTEKPKP 138
            .::.....|.:.|    ..|...||.::|..:                  ..|.|.....|.|.|
Mouse    97 TASSFSAEEWEKIDSDLKSWVSEIKREENTCH------------------FHDPENHPGVEDPLP 143

  Fly   139 -------APKATSPSNTKNKEARIK-STDYRKWDKYDPDEEILRMDLNEERDQEQREKIISNHSK 195
                   .|.:...:.:|:|.|:.: ..||.:|||:|.::|..::      |::.:||.:.|:..
Mouse   144 PVRGSTCCPHSGKETYSKSKTAKKRIPRDYAEWDKFDVEKECSKI------DEDYKEKTVINNKA 202

  Fly   196 SVTTDKLQSERDSLYERLQAQLKNLSQLEKEQFAERHRLRGNESFKAKEYENAIEEYNCSIIYDP 260
            .::..:.:.|...|.|:           ||...|.|.:.:|||:|.:.:||.|:..|..|:...|
Mouse   203 HLSKIETKIETAGLTEK-----------EKSFLANREKGKGNEAFYSGDYEEAVMYYTRSLSALP 256

  Fly   261 ENAVHAYNNRAVAHLKLKKYFSAISDCQACLQIDPMNIKAHLRMAEAHNAEGKHLESLNVYKKLL 325
             .|: ||||||.|.:||:::.||:.||:..|::||.|:||.||.|..:..:.|..|:::..:|:|
Mouse   257 -TAI-AYNNRAQAEIKLQRWSSALEDCEKALELDPGNVKALLRRATTYKHQNKLQEAVDDLRKVL 319

  Fly   326 DFEPDNAIAKKAVEKLTSMLGEVAPSS-----ATRLIIEEID 362
            ..||||.:|||.:.::...|....|.|     ..|::|||::
Mouse   320 QVEPDNDLAKKTLSEVERDLKNSEPVSELQTKGKRMVIEEVE 361

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spag1NP_651514.1 TPR_11 229..295 CDD:290150 27/65 (42%)
TPR repeat 229..257 CDD:276809 11/27 (41%)
TPR repeat 262..293 CDD:276809 15/30 (50%)
TPR_11 266..329 CDD:290150 26/62 (42%)
TPR 266..297 CDD:197478 16/30 (53%)
TPR repeat 298..326 CDD:276809 8/27 (30%)
Spag1NP_001346910.1 3a0801s09 214..698 CDD:273380 58/173 (34%)
TPR repeat 229..253 CDD:276809 5/23 (22%)
TPR repeat 258..287 CDD:276809 9/28 (32%)
TPR repeat 292..320 CDD:276809 12/27 (44%)
TPR repeat 445..471 CDD:276809
TPR repeat 483..513 CDD:276809
TPR repeat 518..546 CDD:276809
TPR repeat 619..646 CDD:276809
PLN03088 631..>807 CDD:215568
TPR repeat 651..681 CDD:276809
RPAP3_C 789..878 CDD:404718
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 102 1.000 Domainoid score I6882
eggNOG 1 0.900 - - E2759_KOG1124
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H8081
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D153676at33208
OrthoFinder 1 1.000 - - FOG0008026
OrthoInspector 1 1.000 - - otm43674
orthoMCL 1 0.900 - - OOG6_105718
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1535
SonicParanoid 1 1.000 - - X6081
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1110.750

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