DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spag1 and Sgtb

DIOPT Version :10

Sequence 1:NP_651514.1 Gene:Spag1 / 43239 FlyBaseID:FBgn0039463 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_659087.1 Gene:Sgtb / 218544 MGIID:2444615 Length:304 Species:Mus musculus


Alignment Length:197 Identity:60/197 - (30%)
Similarity:89/197 - (45%) Gaps:22/197 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   181 RDQEQREKIISNHSKSV--------TTDKLQSE------RDSLYERL-----QAQLKNLSQLEKE 226
            |:|.|.:...|:..:|:        |..|:..|      ...|.|..     :..::.||....|
Mouse    16 REQSQMDAYTSDEQESLEVAIQCLETVFKISPEDTHLAVSQPLTEMFTNSVCKNDIRPLSNSVPE 80

  Fly   227 QFAERHRLR--GNESFKAKEYENAIEEYNCSIIYDPENAVHAYNNRAVAHLKLKKYFSAISDCQA 289
            ...:..:|:  ||...|.:.|..|::.|..:|..||.|||: |.|||.|..||..|..||.||:.
Mouse    81 DVGKADQLKDEGNNHMKEENYAAAVDCYTQAIELDPNNAVY-YCNRAAAQSKLSHYTDAIKDCEK 144

  Fly   290 CLQIDPMNIKAHLRMAEAHNAEGKHLESLNVYKKLLDFEPDNAIAKKAVEKLTSMLGEVAPSSAT 354
            .:.||....||:.||..|..|..|..|::..|:|.||.:|:|...|..::.....|.||:..:.|
Mouse   145 AIAIDSKYSKAYGRMGLALTAMNKFEEAVTSYQKALDLDPENDSYKSNLKIAEQKLREVSSPTGT 209

  Fly   355 RL 356
            .|
Mouse   210 GL 211

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spag1NP_651514.1 NlpI <229..373 CDD:443815 47/130 (36%)
TPR repeat 229..257 CDD:276809 7/29 (24%)
TPR repeat 262..293 CDD:276809 15/30 (50%)
TPR repeat 298..326 CDD:276809 10/27 (37%)
SgtbNP_659087.1 SGTA_dimer 5..64 CDD:465168 10/47 (21%)
TPR 1 15..49 7/32 (22%)
TPR 2 85..118 10/32 (31%)
TPR repeat 85..113 CDD:276809 7/27 (26%)
TPR 92..>200 CDD:440225 41/108 (38%)
TPR repeat 118..148 CDD:276809 15/30 (50%)
TPR 3 120..152 15/32 (47%)
TPR 4 153..186 13/32 (41%)
TPR repeat 153..181 CDD:276809 10/27 (37%)

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